Literature DB >> 996548

Is there selection against wobble in codon-anticodon pairing?

W M Fitch.   

Abstract

Among amino acid codons that require a third-position pyrimidine, there is a significant bias favoring the use of cytidine over uracil in MS2 phage RNA. This could arise from selection against wobble pairing in the interaction of transfer RNA and messenger RNA. Among amino acid codons with fourfold degeneracy, there is a bias favoring pyrimidines over purines.

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Year:  1976        PMID： 996548     DOI： 10.1126/science.996548

Source DB:  PubMed          Journal:  Science        ISSN： 0036-8075            Impact factor:   47.728


  14 in total

1.  Variation in G + C-content and codon choice: differences among synonymous codon groups in vertebrate genes.

Authors:  A Marín; J Bertranpetit; J L Oliver; J R Medina
Journal:  Nucleic Acids Res       Date:  1989-08-11       Impact factor: 16.971

2.  Molecular evolution of human and rabbit beta-globin mRNAs.

Authors:  F C Kafatos; A Efstratiadis; B G Forget; S M Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

3.  Bacteriophage MS2 RNA: a correlation between the stability of the codon: anticodon interaction and the choice of code words.

Authors:  H Grosjean; D Sankoff; W M Jou; W Fiers; R J Cedergren
Journal:  J Mol Evol       Date:  1978-12-29       Impact factor: 2.395

4.  Pattern and chance in the use of the genetic code.

Authors:  E M Berger
Journal:  J Mol Evol       Date:  1978-02-21       Impact factor: 2.395

5.  The preferential codon usages in variable and constant regions of immunoglobulin genes are quite distinct from each other.

Authors:  T Miyata; H Hayashida; T Yasunaga; M Hasegawa
Journal:  Nucleic Acids Res       Date:  1979-12-20       Impact factor: 16.971

6.  Secondary structure of MS2 phage RNA and bias in code word usage.

Authors:  M Hasegawa; T Yasunaga; T Miyata
Journal:  Nucleic Acids Res       Date:  1979-12-11       Impact factor: 16.971

Review 7.  Estimating the total number of nucleotide substitutions since the common ancestor of a pair of homologous genes: comparison of several methods and three beta hemoglobin messenger RNA's.

Authors:  W M Fitch
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

8.  The restriction of codon ambiguity on the basis of known variants.

Authors:  W M Fitch
Journal:  J Mol Evol       Date:  1977-11-25       Impact factor: 2.395

9.  Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases.

Authors:  D C Shields; P M Sharp
Journal:  Nucleic Acids Res       Date:  1987-10-12       Impact factor: 16.971

10.  Cloning and analysis of a cDNA coding for bovine prothrombin.

Authors:  R T MacGillivray; S J Degen; T Chandra; S L Woo; E W Davie
Journal:  Proc Natl Acad Sci U S A       Date:  1980-09       Impact factor: 11.205
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