Literature DB >> 9933517

Modeling of overflow metabolism in batch and fed-batch cultures of Escherichia coli.

B Xu1, M Jahic, S O Enfors.   

Abstract

A dynamic model of glucose overflow metabolism in batch and fed-batch cultivations of Escherichia coli W3110 under fully aerobic conditions is presented. Simulation based on the model describes cell growth, respiration, and acetate formation as well as acetate reconsumption during batch cultures, the transition of batch to fed-batch culture, and fed-batch cultures. E. coli excreted acetate only when specific glucose uptake exceeded a critical rate corresponding to a maximum respiration rate. In batch cultures where the glucose uptake was unlimited, the overflow acetate made up to 9. 0 +/- 1.0% carbon/carbon of the glucose consumed. The applicability of the model to dynamic situations was tested by challenging the model with glucose and acetate pulses added during the fed-batch part of the cultures. In the presence of a glucose feed, E. coli utilized acetate 3 times faster than in the absence of glucose. The cells showed no significant difference in maximum specific uptake rate of endogenous acetate produced by glucose overflow and exogenous acetate added to the culture, the value being 0.12-0.18 g g-1 h-1 during the entire fed-batch culture period. Acetate inhibited the specific growth rate according to a noncompetitive model, with the inhibition constant (ki) being 9 g of acetate/L. This was due to the reduced rate of glucose uptake rather than the reduced yield of biomass.

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Year:  1999        PMID: 9933517     DOI: 10.1021/bp9801087

Source DB:  PubMed          Journal:  Biotechnol Prog        ISSN: 1520-6033


  29 in total

1.  Flux to acetate and lactate excretions in industrial fermentations: physiological and biochemical implications.

Authors:  Mansi El-Mansi
Journal:  J Ind Microbiol Biotechnol       Date:  2004-07-15       Impact factor: 3.346

Review 2.  The acetate switch.

Authors:  Alan J Wolfe
Journal:  Microbiol Mol Biol Rev       Date:  2005-03       Impact factor: 11.056

3.  Global transcription and metabolic flux analysis of Escherichia coli in glucose-limited fed-batch cultivations.

Authors:  K Lemuth; T Hardiman; S Winter; D Pfeiffer; M A Keller; S Lange; M Reuss; R D Schmid; M Siemann-Herzberg
Journal:  Appl Environ Microbiol       Date:  2008-09-19       Impact factor: 4.792

4.  Characterization of the interactions between the nucleoprotein and the phosphoprotein of Henipavirus.

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Journal:  J Biol Chem       Date:  2011-02-11       Impact factor: 5.157

5.  Data-based dynamic compartment model: Modeling of E. coli fed-batch fermentation in a 600 m3 bubble column.

Authors:  Jonas Bisgaard; James A Zahn; Tannaz Tajsoleiman; Tue Rasmussen; Jakob K Huusom; Krist V Gernaey
Journal:  J Ind Microbiol Biotechnol       Date:  2022-10-13       Impact factor: 4.258

6.  Acetate Exposure Determines the Diauxic Behavior of Escherichia coli during the Glucose-Acetate Transition.

Authors:  Brice Enjalbert; Muriel Cocaign-Bousquet; Jean-Charles Portais; Fabien Letisse
Journal:  J Bacteriol       Date:  2015-07-27       Impact factor: 3.490

7.  Quantifying the effects of the division of labor in metabolic pathways.

Authors:  Emily Harvey; Jeffrey Heys; Tomáš Gedeon
Journal:  J Theor Biol       Date:  2014-07-17       Impact factor: 2.691

8.  There is a baby in the bath water: AcrB contamination is a major problem in membrane-protein crystallization.

Authors:  David Veesler; Stéphanie Blangy; Christian Cambillau; Giuliano Sciara
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-09-30

9.  Measuring and modeling energy and power consumption in living microbial cells with a synthetic ATP reporter.

Authors:  Yijie Deng; Douglas Raymond Beahm; Steven Ionov; Rahul Sarpeshkar
Journal:  BMC Biol       Date:  2021-05-17       Impact factor: 7.431

10.  Development of a modified Respiration Activity Monitoring System for accurate and highly resolved measurement of respiration activity in shake flask fermentations.

Authors:  Sven Hansen; Ioanna Hariskos; Bettina Luchterhand; Jochen Büchs
Journal:  J Biol Eng       Date:  2012-08-17       Impact factor: 4.355

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