Literature DB >> 9931023

Arginine activity in the proton-motive photocycle of bacteriorhodopsin: solid-state NMR studies of the wild-type and D85N proteins.

A T Petkova1, J G Hu, M Bizounok, M Simpson, R G Griffin, J Herzfeld.   

Abstract

15N solid-state NMR (SSNMR) spectra of guanidyl-15N-labeled bacteriorhodopsin (bR) show perturbation of an arginine residue upon deprotonation of the retinal Schiff base during the photocycle. At the epsilon position, an upfield shift of 4 ppm is observed while the eta nitrogens develop a pair of 'wing' peaks separated by 24 ppm. Proton-driven spin diffusion between the two 'wing' peaks indicates that they arise from a single Arg residue. An unusually asymmetric environment for this residue is indicated by comparison with guanidyl-15N chemical shifts in a series of arginine model compounds. The 'wing' peaks are tentatively assigned to Arg-82 on the basis of the SSNMR investigations of the alkaline and neutral dark-adapted forms of the D85N bacteriorhodopsin mutant. Another, less asymmetric pair of eta signals, that is not affected by Schiff base deprotonation or D85 mutation, is tentatively assigned to Arg-134. The results are discussed in relation to existing models of bR structure and function.

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Year:  1999        PMID: 9931023     DOI: 10.1021/bi981968z

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  14 in total

1.  Modulation of the pHLIP transmembrane helix insertion pathway.

Authors:  Alexander G Karabadzhak; Dhammika Weerakkody; Dayanjali Wijesinghe; Mak S Thakur; Donald M Engelman; Oleg A Andreev; Vladislav S Markin; Yana K Reshetnyak
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

2.  Highly conserved tyrosine stabilizes the active state of rhodopsin.

Authors:  Joseph A Goncalves; Kieron South; Shivani Ahuja; Ekaterina Zaitseva; Chikwado A Opefi; Markus Eilers; Reiner Vogel; Philip J Reeves; Steven O Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

3.  Two groups control light-induced Schiff base deprotonation and the proton affinity of Asp85 in the Arg82 his mutant of bacteriorhodopsin.

Authors:  E S Imasheva; S P Balashov; T G Ebrey; N Chen; R K Crouch; D R Menick
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

4.  pH-dependent random coil (1)H, (13)C, and (15)N chemical shifts of the ionizable amino acids: a guide for protein pK a measurements.

Authors:  Gerald Platzer; Mark Okon; Lawrence P McIntosh
Journal:  J Biomol NMR       Date:  2014-09-20       Impact factor: 2.835

5.  Conformational disorder of membrane peptides investigated from solid-state NMR line widths and line shapes.

Authors:  Yongchao Su; Mei Hong
Journal:  J Phys Chem B       Date:  2011-08-18       Impact factor: 2.991

6.  Coordinating the structural rearrangements associated with unidirectional proton transfer in the bacteriorhodopsin photocycle induced by deprotonation of the proton-release group: a time-resolved difference FTIR spectroscopic study.

Authors:  Joel E Morgan; Ahmet S Vakkasoglu; Janos K Lanyi; Robert B Gennis; Akio Maeda
Journal:  Biochemistry       Date:  2010-04-20       Impact factor: 3.162

7.  Structure of the Na,K-ATPase regulatory protein FXYD2b in micelles: implications for membrane-water interfacial arginines.

Authors:  Xiao-Min Gong; Yi Ding; Jinghua Yu; Yong Yao; Francesca M Marassi
Journal:  Biochim Biophys Acta       Date:  2014-05-02

8.  Water-protein interactions of an arginine-rich membrane peptide in lipid bilayers investigated by solid-state nuclear magnetic resonance spectroscopy.

Authors:  Shenhui Li; Yongchao Su; Wenbin Luo; Mei Hong
Journal:  J Phys Chem B       Date:  2010-03-25       Impact factor: 2.991

9.  Role of Arg-72 of pharaonis Phoborhodopsin (sensory rhodopsin II) on its photochemistry.

Authors:  Yukako Ikeura; Kazumi Shimono; Masayuki Iwamoto; Yuki Sudo; Naoki Kamo
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

10.  DNP enhanced frequency-selective TEDOR experiments in bacteriorhodopsin.

Authors:  Vikram S Bajaj; Melody L Mak-Jurkauskas; Marina Belenky; Judith Herzfeld; Robert G Griffin
Journal:  J Magn Reson       Date:  2009-09-09       Impact factor: 2.229

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