Literature DB >> 9929340

An evaluation of natural language processing methodologies.

C Friedman1, G Hripcsak, I Shablinsky.   

Abstract

Medical language processing (MLP) systems that codify information in textual patient reports have been developed to help solve the data entry problem. Some systems have been evaluated in order to assess performance, but there has been little evaluation of the underlying technology. Various methodologies are used by the different MLP systems but a comparison of the methods has not been performed although evaluations of MLP methodologies would be extremely beneficial to the field. This paper describes a study that evaluates different techniques. To accomplish this task an existing MLP system MedLEE was modified and results from a previous study were used. Based on confidence intervals and differences in sensitivity and specificity between each technique and all the others combined, the results showed that the two methods based on obtaining the largest well-formed segment within a sentence had significantly higher sensitivity than the others by 5% and 6%. The method based on recognizing a complete sentence had a significantly worse sensitivity than the others by 7% and a better specificity by .2%. None of the methods had significantly worse specificity.

Entities:  

Mesh:

Year:  1998        PMID: 9929340      PMCID: PMC2232366     

Source DB:  PubMed          Journal:  Proc AMIA Symp        ISSN: 1531-605X


  9 in total

1.  Natural language processing and semantical representation of medical texts.

Authors:  R H Baud; A M Rassinoux; J R Scherrer
Journal:  Methods Inf Med       Date:  1992-06       Impact factor: 2.176

2.  Computerized extraction of coded findings from free-text radiologic reports. Work in progress.

Authors:  P J Haug; D L Ranum; P R Frederick
Journal:  Radiology       Date:  1990-02       Impact factor: 11.105

3.  The application of natural-language processing to healthcare quality assessment.

Authors:  M Lyman; N Sager; L Tick; N Nhan; F Borst; J R Scherrer
Journal:  Med Decis Making       Date:  1991 Oct-Dec       Impact factor: 2.583

4.  Extracting findings from narrative reports: software transferability and sources of physician disagreement.

Authors:  G Hripcsak; G J Kuperman; C Friedman
Journal:  Methods Inf Med       Date:  1998-01       Impact factor: 2.176

Review 5.  Natural language processing in medicine: an overview.

Authors:  P Spyns
Journal:  Methods Inf Med       Date:  1996-12       Impact factor: 2.176

Review 6.  Natural language processing and the representation of clinical data.

Authors:  N Sager; M Lyman; C Bucknall; N Nhan; L J Tick
Journal:  J Am Med Inform Assoc       Date:  1994 Mar-Apr       Impact factor: 4.497

7.  A general natural-language text processor for clinical radiology.

Authors:  C Friedman; P O Alderson; J H Austin; J J Cimino; S B Johnson
Journal:  J Am Med Inform Assoc       Date:  1994 Mar-Apr       Impact factor: 4.497

8.  MENELAS: an access system for medical records using natural language.

Authors:  P Zweigenbaum
Journal:  Comput Methods Programs Biomed       Date:  1994-10       Impact factor: 5.428

9.  Unlocking clinical data from narrative reports: a study of natural language processing.

Authors:  G Hripcsak; C Friedman; P O Alderson; W DuMouchel; S B Johnson; P D Clayton
Journal:  Ann Intern Med       Date:  1995-05-01       Impact factor: 25.391

  9 in total
  9 in total

1.  A reliability study for evaluating information extraction from radiology reports.

Authors:  G Hripcsak; G J Kuperman; C Friedman; D F Heitjan
Journal:  J Am Med Inform Assoc       Date:  1999 Mar-Apr       Impact factor: 4.497

2.  Automated extraction and normalization of findings from cancer-related free-text radiology reports.

Authors:  Burke W Mamlin; Daniel T Heinze; Clement J McDonald
Journal:  AMIA Annu Symp Proc       Date:  2003

Review 3.  Conceptual knowledge acquisition in biomedicine: A methodological review.

Authors:  Philip R O Payne; Eneida A Mendonça; Stephen B Johnson; Justin B Starren
Journal:  J Biomed Inform       Date:  2007-03-27       Impact factor: 6.317

4.  Recognizing obesity and comorbidities in sparse data.

Authors:  Ozlem Uzuner
Journal:  J Am Med Inform Assoc       Date:  2009-04-23       Impact factor: 4.497

5.  Augmented intelligence with natural language processing applied to electronic health records for identifying patients with non-alcoholic fatty liver disease at risk for disease progression.

Authors:  Tielman T Van Vleck; Lili Chan; Steven G Coca; Catherine K Craven; Ron Do; Stephen B Ellis; Joseph L Kannry; Ruth J F Loos; Peter A Bonis; Judy Cho; Girish N Nadkarni
Journal:  Int J Med Inform       Date:  2019-07-06       Impact factor: 4.046

6.  Community annotation experiment for ground truth generation for the i2b2 medication challenge.

Authors:  Ozlem Uzuner; Imre Solti; Fei Xia; Eithon Cadag
Journal:  J Am Med Inform Assoc       Date:  2010 Sep-Oct       Impact factor: 4.497

7.  Combining PubMed knowledge and EHR data to develop a weighted bayesian network for pancreatic cancer prediction.

Authors:  Di Zhao; Chunhua Weng
Journal:  J Biomed Inform       Date:  2011-05-27       Impact factor: 6.317

8.  Chapter 13: Mining electronic health records in the genomics era.

Authors:  Joshua C Denny
Journal:  PLoS Comput Biol       Date:  2012-12-27       Impact factor: 4.475

9.  Chapter 1: Biomedical knowledge integration.

Authors:  Philip R O Payne
Journal:  PLoS Comput Biol       Date:  2012-12-27       Impact factor: 4.475

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.