Literature DB >> 9922172

Dynamics and thermodynamics of the regulatory domain of human cardiac troponin C in the apo- and calcium-saturated states.

L Spyracopoulos1, S M Gagné, M X Li, B D Sykes.   

Abstract

The contraction of cardiac and skeletal muscles is triggered by the binding of Ca2+ to their respective troponin C (TnC) proteins. Recent structural data of both cardiac and skeletal TnC in both the apo and Ca2+ states have revealed that the response to Ca2+ is fundamentally different for these two proteins. For skeletal TnC, binding of two Ca2+ to sites 1 and 2 leads to large changes in the structure, resulting in the exposure of a hydrophobic surface. For cardiac TnC, Ca2+ binds site 2 only, as site 1 is inactive, and the structures show that the Ca2+-induced changes are much smaller and do not result in the exposure of a large hydrophobic surface. To understand the differences between regulation of skeletal and cardiac muscle, we have investigated the effect of Ca2+ binding on the dynamics and thermodynamics of the regulatory N-domain of cardiac TnC (cNTnC) using backbone 15N nuclear magnetic resonance relaxation measurements for comparison to the skeletal system. Analysis of the relaxation data allows for the estimation of the contribution of changes in picosecond to nanosecond time scale motions to the conformational entropy of the Ca2+-binding sites on a per residue basis, which can be related to the structural features of the sites. The results indicate that binding of Ca2+ to the functional site in cNTnC makes the site more rigid with respect to high-frequency motions; this corresponds to a decrease in the conformational entropy (TdeltaS) of the site by 2.2 kcal mol(-1). Although site 1 is defunct, binding to site 2 also decreases the conformational entropy in the nonfunctional site by 0.5 kcal mol(-1). The results indicate that the Ca2+-binding sites in the regulatory domain are structurally and energetically coupled despite the inability of site 1 to bind Ca2+. Comparison between the cardiac and skeletal isoforms in the apo state shows that there is a decrease in conformational entropy of 0.9 kcal mol(-1) for site 1 of cNTnC and little difference for site 2.

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Year:  1998        PMID: 9922172     DOI: 10.1021/bi9816960

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Backbone dynamics of the regulatory domain of calcium vector protein, studied by (15)N relaxation at four fields, reveals unique mobility characteristics of the intermotif linker.

Authors:  I Théret; J A Cox; J Mispelter; C T Craescu
Journal:  Protein Sci       Date:  2001-07       Impact factor: 6.725

2.  Influence of length on force and activation-dependent changes in troponin c structure in skinned cardiac and fast skeletal muscle.

Authors:  D A Martyn; A M Gordon
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

3.  Ligand-induced changes in dynamics in the RT loop of the C-terminal SH3 domain of Sem-5 indicate cooperative conformational coupling.

Authors:  Josephine C Ferreon; Vincent J Hilser
Journal:  Protein Sci       Date:  2003-05       Impact factor: 6.725

4.  NMR backbone dynamics of VEK-30 bound to the human plasminogen kringle 2 domain.

Authors:  Min Wang; Mary Prorok; Francis J Castellino
Journal:  Biophys J       Date:  2010-07-07       Impact factor: 4.033

5.  Observation of microsecond time-scale protein dynamics in the presence of Ln3+ ions: application to the N-terminal domain of cardiac troponin C.

Authors:  Christian Eichmüller; Nikolai R Skrynnikov
Journal:  J Biomol NMR       Date:  2006-12-19       Impact factor: 2.835

6.  A new amide proton R1rho experiment permits accurate characterization of microsecond time-scale conformational exchange.

Authors:  Christian Eichmüller; Nikolai R Skrynnikov
Journal:  J Biomol NMR       Date:  2005-08       Impact factor: 2.835

7.  Crystal structure of cardiac troponin C regulatory domain in complex with cadmium and deoxycholic acid reveals novel conformation.

Authors:  Alison Yueh Li; Jaeyong Lee; Dominika Borek; Zbyszek Otwinowski; Glen F Tibbits; Mark Paetzel
Journal:  J Mol Biol       Date:  2011-09-06       Impact factor: 5.469

8.  Finite Element Estimation of Protein-Ligand Association Rates with Post-Encounter Effects: Applications to Calcium binding in Troponin C and SERCA.

Authors:  P M Kekenes-Huskey; A Gillette; J Hake; J A McCammon
Journal:  Comput Sci Discov       Date:  2012-10-31

9.  Structure and dynamics of Ca2+-binding domain 1 of the Na+/Ca2+ exchanger in the presence and in the absence of Ca2+.

Authors:  Eric Johnson; Lei Bruschweiler-Li; Scott A Showalter; Geerten W Vuister; Fengli Zhang; Rafael Brüschweiler
Journal:  J Mol Biol       Date:  2008-01-30       Impact factor: 5.469

10.  Troponin regulatory function and dynamics revealed by H/D exchange-mass spectrometry.

Authors:  Devanand Kowlessur; Larry S Tobacman
Journal:  J Biol Chem       Date:  2009-11-17       Impact factor: 5.157

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