Literature DB >> 9906992

Efficient Monte Carlo methods for the computer simulation of biological molecules.

.   

Abstract

Year:  1992        PMID： 9906992     DOI： 10.1103/physreva.45.8894

Source DB:  PubMed          Journal:  Phys Rev A        ISSN： 1050-2947            Impact factor:   3.140


× No keyword cloud information.
  9 in total

1.  Deciphering common failures in molecular docking of ligand-protein complexes.

Authors:  G M Verkhivker; D Bouzida; D K Gehlhaar; P A Rejto; S Arthurs; A B Colson; S T Freer; V Larson; B A Luty; T Marrone; P W Rose
Journal:  J Comput Aided Mol Des       Date:  2000-11       Impact factor: 3.686

2.  Simulating disorder-order transitions in molecular recognition of unstructured proteins: where folding meets binding.

Authors:  Gennady M Verkhivker; Djamal Bouzida; Daniel K Gehlhaar; Paul A Rejto; Stephan T Freer; Peter W Rose
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-15       Impact factor: 11.205

Review 3.  CHARMM: the biomolecular simulation program.

Authors:  B R Brooks; C L Brooks; A D Mackerell; L Nilsson; R J Petrella; B Roux; Y Won; G Archontis; C Bartels; S Boresch; A Caflisch; L Caves; Q Cui; A R Dinner; M Feig; S Fischer; J Gao; M Hodoscek; W Im; K Kuczera; T Lazaridis; J Ma; V Ovchinnikov; E Paci; R W Pastor; C B Post; J Z Pu; M Schaefer; B Tidor; R M Venable; H L Woodcock; X Wu; W Yang; D M York; M Karplus
Journal:  J Comput Chem       Date:  2009-07-30       Impact factor: 3.376

4.  Modeling of protein loops by simulated annealing.

Authors:  V Collura; J Higo; J Garnier
Journal:  Protein Sci       Date:  1993-09       Impact factor: 6.725

5.  Monte Carlo study of the effect of beta 2-microglobulin on the binding cleft of the HLA-A2 complex.

Authors:  D Bouzida; J Garnier; R Brower; J Cornette; C DeLisi
Journal:  Protein Sci       Date:  1994-06       Impact factor: 6.725

6.  Estimation of Hydrogen-Exchange Protection Factors from MD Simulation Based on Amide Hydrogen Bonding Analysis.

Authors:  In-Hee Park; John D Venable; Caitlin Steckler; Susan E Cellitti; Scott A Lesley; Glen Spraggon; Ansgar Brock
Journal:  J Chem Inf Model       Date:  2015-08-20       Impact factor: 4.956

7.  Unbiased, scalable sampling of protein loop conformations from probabilistic priors.

Authors:  Yajia Zhang; Kris Hauser
Journal:  BMC Struct Biol       Date:  2013-11-08

8.  Aromatic N versus aromatic F: bioisosterism discovered in RNA base pairing interactions leads to a novel class of universal base analogs.

Authors:  Alrun N Koller; Jelena Bozilovic; Joachim W Engels; Holger Gohlke
Journal:  Nucleic Acids Res       Date:  2010-01-15       Impact factor: 16.971

9.  Bending Rigidities and Interdomain Forces in Membranes with Coexisting Lipid Domains.

Authors:  Benjamin Kollmitzer; Peter Heftberger; Rudolf Podgornik; John F Nagle; Georg Pabst
Journal:  Biophys J       Date:  2015-06-16       Impact factor: 4.033
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.