Literature DB >> 9890922

Hydrogen bonding interaction between the primary quinone acceptor QA and a histidine side chain in photosystem II as revealed by Fourier transform infrared spectroscopy.

T Noguchi1, Y Inoue, X S Tang.   

Abstract

Interactions of the primary quinone acceptor QA of photosystem II (PS II) with surrounding amino acid residues were studied by analysis of FTIR difference spectra of QA upon its photoreduction (QA-/QA). Structural coupling with a His side chain was revealed by identifying the imidazole bands in the QA-/QA spectrum using the PS II core complexes from Synechocystis PCC 6803 in which both of the two imodazole nitrogens of His side chains were specifically labeled with 15N. Strong hydrogen bonding of the imidazole NH was shown by (i) the presence of several peaks at 2600-3000 cm-1, which arise from Fermi resonance of harmonics or combinations of imidazole ring modes with the hydrogen bonding NH stretching vibration, and (ii) the 1179 cm-1 band, which can be assigned to the mode including NH deformation, is at a frequency significantly higher than the corresponding 1151 cm-1 band of model compounds 4- and 5-methylimidazole in aqueous solution. Also, the presence of the bands specific to the Npi-protonated state at 1109/1102/1090 and 1359 cm-1 suggests that the QA-coupled His is protonated at the Npi site. These results are in good agreement with the model of QA interaction in which His215 (D2), which coordinates to the non-heme iron at Ntau, is hydrogen bonded to the QA carbonyl through the Npi-H bond. In contrast, no bands of Trp side chains were detected in the QA-/QA spectrum upon labeling of the indole ring of Trp residues with indole-d5. This result indicates that Trp254 (D2), which corresponds to Trp252 (M) of the bacterial reaction center that is located in van der Waals contact with QA, is not strongly coupled with QA in PS II. Probably, the predicted pi-pi interaction is not strong enough to influence the vibrations of the indole ring of Trp upon QA reduction, or Trp254 (D2) is located rather far from QA in PS II.

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Year:  1999        PMID: 9890922     DOI: 10.1021/bi982294v

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  8 in total

1.  Mode recognition in UV resonance Raman spectra of imidazole: histidine monitoring in proteins.

Authors:  Gurusamy Balakrishnan; Andrzej A Jarzecki; Qiang Wu; Pawel M Kozlowski; Daojing Wang; Thomas G Spiro
Journal:  J Phys Chem B       Date:  2012-07-30       Impact factor: 2.991

2.  Modified molecular interactions of the pheophytin and plastoquinone electron acceptors in photosystem II of chlorophyll D-containing Acaryochloris marina as revealed by FTIR spectroscopy.

Authors:  Yuko Sano; Kaichiro Endo; Tatsuya Tomo; Takumi Noguchi
Journal:  Photosynth Res       Date:  2015-01-06       Impact factor: 3.573

3.  An FTIR study on the structure of the oxygen-evolving Mn-cluster of Photosystem II in different spin forms of the S(2) state.

Authors:  K Onoda; H Mino; Y Inoue; T Noguchi
Journal:  Photosynth Res       Date:  2000       Impact factor: 3.573

4.  Thermodynamic and structural characterization of an antibody gel.

Authors:  Osigwe Esue; Anna X Xie; Tim J Kamerzell; Thomas W Patapoff
Journal:  MAbs       Date:  2013-02-20       Impact factor: 5.857

5.  Identification of FTIR bands due to internal water molecules around the quinone binding sites in the reaction center from Rhodobacter sphaeroides.

Authors:  Tatsuya Iwata; Mark L Paddock; Melvin Y Okamura; Hideki Kandori
Journal:  Biochemistry       Date:  2009-02-17       Impact factor: 3.162

6.  Synthesis and biological evaluation of new imidazolium and piperazinium salts of pyropheophorbide-a for photodynamic cancer therapy.

Authors:  Gerelt-Ireedui Sengee; Narangerel Badraa; Young Key Shim
Journal:  Int J Mol Sci       Date:  2008-08-13       Impact factor: 6.208

7.  His166 is the Schiff base proton acceptor in attractant phototaxis receptor sensory rhodopsin I.

Authors:  Jun Sasaki; Hazuki Takahashi; Yuji Furutani; Oleg A Sineshchekov; John L Spudich; Hideki Kandori
Journal:  Biochemistry       Date:  2014-09-08       Impact factor: 3.162

8.  Terminal Electron-Proton Transfer Dynamics in the Quinone Reduction of Respiratory Complex I.

Authors:  Ana P Gamiz-Hernandez; Alexander Jussupow; Mikael P Johansson; Ville R I Kaila
Journal:  J Am Chem Soc       Date:  2017-11-01       Impact factor: 15.419

  8 in total

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