Literature DB >> 9872791

Phylogenetic analysis of an anaerobic, trichlorobenzene-transforming microbial consortium.

F von Wintzingerode1, B Selent, W Hegemann, U B Göbel.   

Abstract

A culture-independent phylogenetic survey for an anaerobic trichlorobenzene-transforming microbial community was carried out. Small-subunit rRNA genes were PCR amplified from community DNA by using primers specific for Bacteria or Euryarchaeota and were subsequently cloned. Application of a new hybridization-based screening approach revealed 51 bacterial clone families, one of which was closely related to dechlorinating Dehalobacter species. Several clone sequences clustered to rDNA sequences obtained from a molecular study of an anaerobic aquifer contaminated with hydrocarbons and chlorinated solvents (Dojka et al., Appl. Env. Microbiol. 64:3869-3877, 1998).

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Year:  1999        PMID： 9872791      PMCID： PMC91014     

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  17 in total

Review 1.  Phylogenetic identification and in situ detection of individual microbial cells without cultivation.

Authors:  R I Amann; W Ludwig; K H Schleifer
Journal:  Microbiol Rev       Date:  1995-03

2.  Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment.

Authors:  S M Barns; R E Fundyga; M W Jeffries; N R Pace
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-01       Impact factor: 11.205

3.  Novel division level bacterial diversity in a Yellowstone hot spring.

Authors:  P Hugenholtz; C Pitulle; K L Hershberger; N R Pace
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

4.  Diversity of uncultured microorganisms associated with the seagrass Halophila stipulacea estimated by restriction fragment length polymorphism analysis of PCR-amplified 16S rRNA genes.

Authors:  S Weidner; W Arnold; A Puhler
Journal:  Appl Environ Microbiol       Date:  1996-03       Impact factor: 4.792

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  The ribosomal database project.

Authors:  N Larsen; G J Olsen; B L Maidak; M J McCaughey; R Overbeek; T J Macke; T L Marsh; C R Woese
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

7.  Enrichment and properties of an anaerobic mixed culture reductively dechlorinating 1,2,3-trichlorobenzene to 1,3-dichlorobenzene.

Authors:  C Holliger; G Schraa; A J Stams; A J Zehnder
Journal:  Appl Environ Microbiol       Date:  1992-05       Impact factor: 4.792

8.  Dehalobacter restrictus gen. nov. and sp. nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trichloroethene in an anaerobic respiration.

Authors:  C Holliger; D Hahn; H Harmsen; W Ludwig; W Schumacher; B Tindall; F Vazquez; N Weiss; A J Zehnder
Journal:  Arch Microbiol       Date:  1998-04       Impact factor: 2.552

9.  Enrichment and properties of a 1,2,4-trichlorobenzene-dechlorinating methanogenic microbial consortium.

Authors:  P Middeldorp; J De Wolf; A Zehnder; G Schraa
Journal:  Appl Environ Microbiol       Date:  1997-04       Impact factor: 4.792

10.  Reductive dehalogenation of chlorinated benzenes and toluenes under methanogenic conditions.

Authors:  K Ramanand; M T Balba; J Duffy
Journal:  Appl Environ Microbiol       Date:  1993-10       Impact factor: 4.792
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  35 in total

1.  Peptide nucleic acid-mediated PCR clamping as a useful supplement in the determination of microbial diversity.

Authors:  F von Wintzingerode; O Landt; A Ehrlich; U B Göbel
Journal:  Appl Environ Microbiol       Date:  2000-02       Impact factor: 4.792

2.  Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities.

Authors:  Andreas Teske; Kai-Uwe Hinrichs; Virginia Edgcomb; Alvin de Vera Gomez; David Kysela; Sean P Sylva; Mitchell L Sogin; Holger W Jannasch
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

3.  Molecular and culture-based analyses of prokaryotic communities from an agricultural soil and the burrows and casts of the earthworm Lumbricus rubellus.

Authors:  Michelle A Furlong; David R Singleton; David C Coleman; William B Whitman
Journal:  Appl Environ Microbiol       Date:  2002-03       Impact factor: 4.792

4.  Benthic eukaryotic diversity in the Guaymas Basin hydrothermal vent environment.

Authors:  Virginia P Edgcomb; David T Kysela; Andreas Teske; Alvin de Vera Gomez; Mitchell L Sogin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

5.  Fingerprinting microbial assemblages from the oxic/anoxic chemocline of the Black Sea.

Authors:  Costantino Vetriani; Hiep V Tran; Lee J Kerkhof
Journal:  Appl Environ Microbiol       Date:  2003-11       Impact factor: 4.792

6.  Growth of Dehalobacter and Dehalococcoides spp. during degradation of chlorinated ethanes.

Authors:  Ariel Grostern; Elizabeth A Edwards
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

7.  Diversity, localization, and physiological properties of filamentous microbes belonging to Chloroflexi subphylum I in mesophilic and thermophilic methanogenic sludge granules.

Authors:  Takeshi Yamada; Yuji Sekiguchi; Hiroyuki Imachi; Yoichi Kamagata; Akiyoshi Ohashi; Hideki Harada
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

8.  The community and phylogenetic diversity of biological soil crusts in the Colorado Plateau studied by molecular fingerprinting and intensive cultivation.

Authors:  Sathyanarayana Reddy Gundlapally; Ferran Garcia-Pichel
Journal:  Microb Ecol       Date:  2006-05-12       Impact factor: 4.552

9.  16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order "Rhodocyclales".

Authors:  Alexander Loy; Claudia Schulz; Sebastian Lücker; Andreas Schöpfer-Wendels; Kilian Stoecker; Christian Baranyi; Angelika Lehner; Michael Wagner
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

10.  Molecular characterization of sulfate-reducing bacteria in the Guaymas Basin.

Authors:  Ashita Dhillon; Andreas Teske; Jesse Dillon; David A Stahl; Mitchell L Sogin
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792
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