Literature DB >> 9866200

Estimating the rate of evolution of the rate of molecular evolution.

J L Thorne1, H Kishino, I S Painter.   

Abstract

A simple model for the evolution of the rate of molecular evolution is presented. With a Bayesian approach, this model can serve as the basis for estimating dates of important evolutionary events even in the absence of the assumption of constant rates among evolutionary lineages. The method can be used in conjunction with any of the widely used models for nucleotide substitution or amino acid replacement. It is illustrated by analyzing a data set of rbcL protein sequences.

Mesh:

Substances:

Year:  1998        PMID: 9866200     DOI: 10.1093/oxfordjournals.molbev.a025892

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  266 in total

1.  A compound poisson process for relaxing the molecular clock.

Authors:  J P Huelsenbeck; B Larget; D Swofford
Journal:  Genetics       Date:  2000-04       Impact factor: 4.562

Review 2.  Evolution of genes and taxa: a primer.

Authors:  J J Doyle; B S Gaut
Journal:  Plant Mol Biol       Date:  2000-01       Impact factor: 4.076

3.  Independent adaptation to riverine habitats allowed survival of ancient cetacean lineages.

Authors:  I Cassens; S Vicario; V G Waddell; H Balchowsky; D Van Belle; W Ding; C Fan; R S Mohan; P C Simões-Lopes; R Bastida; A Meyer; M J Stanhope; M C Milinkovitch
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-10       Impact factor: 11.205

4.  Testing macro-evolutionary models using incomplete molecular phylogenies.

Authors:  O G Pybus; P H Harvey
Journal:  Proc Biol Sci       Date:  2000-11-22       Impact factor: 5.349

5.  Rate heterogeneity among lineages of tracheophytes: integration of molecular and fossil data and evidence for molecular living fossils.

Authors:  Pamela S Soltis; Douglas E Soltis; Vincent Savolainen; Peter R Crane; Timothy G Barraclough
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-26       Impact factor: 11.205

6.  Estimating the age of the polydnavirus/braconid wasp symbiosis.

Authors:  James B Whitfield
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

7.  An ensemble method for identifying regulatory circuits with special reference to the qa gene cluster of Neurospora crassa.

Authors:  D Battogtokh; D K Asch; M E Case; J Arnold; H-B Schuttler
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-11       Impact factor: 11.205

8.  Evolution of the army ant syndrome: the origin and long-term evolutionary stasis of a complex of behavioral and reproductive adaptations.

Authors:  Seán G Brady
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-15       Impact factor: 11.205

Review 9.  Genomic biodiversity, phylogenetics and coevolution in proteins.

Authors:  David D Pollock
Journal:  Appl Bioinformatics       Date:  2002

10.  The molecular population genetics of HIV-1 group O.

Authors:  Philippe Lemey; Oliver G Pybus; Andrew Rambaut; Alexei J Drummond; David L Robertson; Pierre Roques; Michael Worobey; Anne-Mieke Vandamme
Journal:  Genetics       Date:  2004-07       Impact factor: 4.562

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.