Literature DB >> 9860868

Spectroscopic evidence for nanosecond protein relaxation after photodissociation of myoglobin-CO.

R M Esquerra1, R A Goldbeck, D B Kim-Shapiro, D S Kliger.   

Abstract

Nanosecond time-resolved absorption and magnetic optical rotatory dispersion (MORD) measurements of photolyzed myoglobin-CO visible bands (500-650 nm) are presented. These measurements reveal a 400 ns process, spectrally distinct from ligand recombination, that accounts for 7% of the observed spectral evolution in the visible absorption bands and 4% in the MORD. The time-resolved MORD, more sensitive to heme coordination geometry than absorption, suggests that this process is most likely associated with protein relaxation on the distal side of the heme pocket, perhaps accompanying rehydration of the deoxymyoglobin photoproduct or accommodation of protein side chains to ligand escape.

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Year:  1998        PMID: 9860868     DOI: 10.1021/bi9814437

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

1.  Protein dynamics in an intermediate state of myoglobin: optical absorption, resonance Raman spectroscopy, and x-ray structure analysis.

Authors:  N Engler; A Ostermann; A Gassmann; D C Lamb; V E Prusakov; J Schott; R Schweitzer-Stenner; F G Parak
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

2.  Multiple geminate ligand recombinations in human hemoglobin.

Authors:  R M Esquerra; R A Goldbeck; S H Reaney; A M Batchelder; Y Wen; J W Lewis; D S Kliger
Journal:  Biophys J       Date:  2000-06       Impact factor: 4.033

3.  Observation of the cascaded atomic-to-global length scales driving protein motion.

Authors:  M R Armstrong; J P Ogilvie; M L Cowan; A M Nagy; R J D Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-15       Impact factor: 11.205

4.  Water and ligand entry in myoglobin: assessing the speed and extent of heme pocket hydration after CO photodissociation.

Authors:  Robert A Goldbeck; Shyam Bhaskaran; Cheri Ortega; Juan L Mendoza; John S Olson; Jayashree Soman; David S Kliger; Raymond M Esquerra
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

5.  The pH dependence of heme pocket hydration and ligand rebinding kinetics in photodissociated carbonmonoxymyoglobin.

Authors:  Raymond M Esquerra; Russell A Jensen; Shyam Bhaskaran; Marlisa L Pillsbury; Juan L Mendoza; Benjamin W Lintner; David S Kliger; Robert A Goldbeck
Journal:  J Biol Chem       Date:  2008-03-20       Impact factor: 5.157

6.  Tracking Equilibrium and Nonequilibrium Shifts in Data with TREND.

Authors:  Jia Xu; Steven R Van Doren
Journal:  Biophys J       Date:  2017-01-24       Impact factor: 4.033

7.  Nanosecond time-resolved polarization spectroscopies: tools for probing protein reaction mechanisms.

Authors:  Eefei Chen; Robert A Goldbeck; David S Kliger
Journal:  Methods       Date:  2010-05-11       Impact factor: 3.608

8.  Kinetic spectroscopy of heme hydration and ligand binding in myoglobin and isolated hemoglobin chains: an optical window into heme pocket water dynamics.

Authors:  Raymond M Esquerra; Ignacio López-Peña; Pooncharas Tipgunlakant; Ivan Birukou; Rosa L Nguyen; Jayashree Soman; John S Olson; David S Kliger; Robert A Goldbeck
Journal:  Phys Chem Chem Phys       Date:  2010-07-29       Impact factor: 3.676

9.  Optical detection of disordered water within a protein cavity.

Authors:  Robert A Goldbeck; Marlisa L Pillsbury; Russell A Jensen; Juan L Mendoza; Rosa L Nguyen; John S Olson; Jayashree Soman; David S Kliger; Raymond M Esquerra
Journal:  J Am Chem Soc       Date:  2009-09-02       Impact factor: 15.419

Review 10.  Probing kinetic mechanisms of protein function and folding with time-resolved natural and magnetic chiroptical spectroscopies.

Authors:  David S Kliger; Eefei Chen; Robert A Goldbeck
Journal:  Int J Mol Sci       Date:  2012-01-10       Impact factor: 6.208

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