Literature DB >> 9847193

The PRESAGE database for structural genomics.

S E Brenner1, D Barken, M Levitt.   

Abstract

The PRESAGE database is a collaborative resource for structural genomics. It provides a database of proteins to which researchers add annotations indicating current experimental status, structural predictions and suggestions. The database is intended to enhance communication among structural genomics researchers and aid dissemination of their results. The PRESAGE database may be accessed at http://presage.stanford.edu/

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Year:  1999        PMID： 9847193      PMCID： PMC148148          DOI： 10.1093/nar/27.1.251

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  14 in total

1.  The IMB Jena Image Library of biological macromolecules.

Authors:  J Reichert; A Jabs; P Slickers; J Sühnel
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 2.  Structural biology.

Authors:  K C Holmes
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1999-12-29       Impact factor: 6.237

3.  Automated search of natively folded protein fragments for high-throughput structure determination in structural genomics.

Authors:  Y Kuroda; K Tani; Y Matsuo; S Yokoyama
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

4.  Links from genome proteins to known 3-D structures.

Authors:  Y Wang; S Bryant; R Tatusov; T Tatusova
Journal:  Genome Res       Date:  2000-10       Impact factor: 9.043

5.  SPINE: an integrated tracking database and data mining approach for identifying feasible targets in high-throughput structural proteomics.

Authors:  P Bertone; Y Kluger; N Lan; D Zheng; D Christendat; A Yee; A M Edwards; C H Arrowsmith; G T Montelione; M Gerstein
Journal:  Nucleic Acids Res       Date:  2001-07-01       Impact factor: 16.971

6.  SCOP database in 2002: refinements accommodate structural genomics.

Authors:  Loredana Lo Conte; Steven E Brenner; Tim J P Hubbard; Cyrus Chothia; Alexey G Murzin
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

7.  SUPFAM--a database of potential protein superfamily relationships derived by comparing sequence-based and structure-based families: implications for structural genomics and function annotation in genomes.

Authors:  Shashi B Pandit; Dilip Gosar; S Abhiman; S Sujatha; Sayali S Dixit; Natasha S Mhatre; R Sowdhamini; N Srinivasan
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

8.  SPINE 2: a system for collaborative structural proteomics within a federated database framework.

Authors:  Chern-Sing Goh; Ning Lan; Nathaniel Echols; Shawn M Douglas; Duncan Milburn; Paul Bertone; Rong Xiao; Li-Chung Ma; Deyou Zheng; Zeba Wunderlich; Tom Acton; Gaetano T Montelione; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2003-06-01       Impact factor: 16.971

9.  The Protein Data Bank and structural genomics.

Authors:  John Westbrook; Zukang Feng; Li Chen; Huanwang Yang; Helen M Berman
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

10.  Sequence-based prediction of protein domains.

Authors:  Jinfeng Liu; Burkhard Rost
Journal:  Nucleic Acids Res       Date:  2004-07-07       Impact factor: 16.971
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