Literature DB >> 9787440

Body size effects and rates of cytochrome b evolution in tube-nosed seabirds.

G B Nunn1, S E Stanley.   

Abstract

Variation in rates of molecular evolution now appears to be widespread. The demonstration that body size is correlated with rates of molecular evolution suggests that physiological and ecological factors may be involved in molecular rate variation, but large-scale comparative studies are still lacking. Here, we use complete cytochrome b sequences from 85 species of tube-nosed seabirds (order Procellariiformes) and 5 outgroup species of penguins (order Sphenisciformes) to test for an association between body mass and rates of molecular evolution within the former avian order. Cladistic analysis of the 90 sequences estimates a phylogeny largely consistent with the traditional taxonomy of the Procellariiformes. The Diomedeidae, Procellariidae, and Pelecanoididae are monophyletic, while the Hydrobatidae are basal and paraphyletic. However, the two subfamilies within the Hydrobatidae (Hydrobatinae and Oceanitinae) are monophyletic. A likelihood ratio test detects significant deviation from clocklike evolution in our data. Using a sign test for an association between body mass and branch length in the seabird phylogeny, we find that larger taxa tend to have shorter terminal branch lengths than smaller taxa. This observation suggests that rates of mitochondrial DNA evolution are slower for larger taxa. Rate calibrations based on the fossil record reveal concordant body size effects. We interpret these results as evidence for a metabolic rate effect, as the species in this order exhibit large differences in metabolic rates, which are known to be highly correlated with body mass in this group. Our results support previous findings of body size effects and show that this effect can be significant even within a single avian order. This suggests that even lineage-specific molecular clocks may not be tenable if calibrations involve taxa with different metabolic rates.

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Year:  1998        PMID: 9787440     DOI: 10.1093/oxfordjournals.molbev.a025864

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  23 in total

1.  Phylogenetic analysis of pelecaniformes (aves) based on osteological data: implications for waterbird phylogeny and fossil calibration studies.

Authors:  Nathan D Smith
Journal:  PLoS One       Date:  2010-10-14       Impact factor: 3.240

2.  Rearrangement and evolution of mitochondrial genomes in parrots.

Authors:  Jessica R Eberhard; Timothy F Wright
Journal:  Mol Phylogenet Evol       Date:  2015-08-17       Impact factor: 4.286

3.  Error in estimation of rate and time inferred from the early amniote fossil record and avian molecular clocks.

Authors:  Marcel van Tuinen; Elizabeth A Hadly
Journal:  J Mol Evol       Date:  2004-08       Impact factor: 2.395

4.  Surviving with low genetic diversity: the case of albatrosses.

Authors:  Emmanuel Milot; Henri Weimerskirch; Pierre Duchesne; Louis Bernatchez
Journal:  Proc Biol Sci       Date:  2007-03-22       Impact factor: 5.349

5.  Metabolic rate does not calibrate the molecular clock.

Authors:  Robert Lanfear; Jessica A Thomas; John J Welch; Thomas Brey; Lindell Bromham
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-19       Impact factor: 11.205

6.  Evolution of olfaction in non-avian theropod dinosaurs and birds.

Authors:  Darla K Zelenitsky; François Therrien; Ryan C Ridgely; Amanda R McGee; Lawrence M Witmer
Journal:  Proc Biol Sci       Date:  2011-04-13       Impact factor: 5.349

7.  Foraging segregation and genetic divergence between geographically proximate colonies of a highly mobile seabird.

Authors:  Anne E Wiley; Andreanna J Welch; Peggy H Ostrom; Helen F James; Craig A Stricker; Robert C Fleischer; Hasand Gandhi; Josh Adams; David G Ainley; Fern Duvall; Nick Holmes; Darcy Hu; Seth Judge; Jay Penniman; Keith A Swindle
Journal:  Oecologia       Date:  2011-08-12       Impact factor: 3.225

8.  Characterization of MHC class I and II genes in a subantarctic seabird, the blue petrel, Halobaena caerulea (Procellariiformes).

Authors:  Maria Strandh; Mimi Lannefors; Francesco Bonadonna; Helena Westerdahl
Journal:  Immunogenetics       Date:  2011-05-24       Impact factor: 2.846

9.  Testing the effect of metabolic rate on DNA variability at the intra-specific level.

Authors:  Angela McGaughran; Barbara R Holland
Journal:  PLoS One       Date:  2010-03-15       Impact factor: 3.240

10.  Higher-order phylogeny of modern birds (Theropoda, Aves: Neornithes) based on comparative anatomy. II. Analysis and discussion.

Authors:  Bradley C Livezey; Richard L Zusi
Journal:  Zool J Linn Soc       Date:  2007-01-01       Impact factor: 3.286

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