Literature DB >> 9742099

Requirements for chromatin modulation and transcription activation by the Pho4 acidic activation domain.

P C McAndrew1, J Svaren, S R Martin, W Hörz, C R Goding.   

Abstract

Perhaps the best characterized example of an activator-induced chromatin transition is found in the activation of the Saccharomyces cerevisiae acid phosphatase gene PHO5 by the basic helix-loop-helix (bHLH) transcription factor Pho4. Transcription activation of the PHO5 promoter by Pho4 is accompanied by the remodeling of four positioned nucleosomes which is dependent on the Pho4 activation domain but independent of transcription initiation. Whether the requirements for transcription activation through the TATA sequence are different from those necessary for the chromatin transition remains a major outstanding question. In an attempt to understand better the ability of Pho4 to activate transcription and to remodel chromatin, we have initiated a detailed characterization of the Pho4 activation domain. Using both deletion and point mutational analysis, we have defined residues between positions 75 and 99 as being both essential and sufficient to mediate transcription activation. Significantly, there is a marked concordance between the ability of mutations in the Pho4 activation domain to induce chromatin opening and transcription activation. Interestingly, the requirements for transcription activation within the Pho4 activation domain differ significantly if fused to a heterologous bHLH-leucine zipper DNA-binding domain. The implications for transcription activation by Pho4 are discussed.

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Year:  1998        PMID: 9742099      PMCID: PMC109168          DOI: 10.1128/MCB.18.10.5818

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  43 in total

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Authors:  Q X Hua; W H Jia; B P Bullock; J F Habener; M A Weiss
Journal:  Biochemistry       Date:  1998-04-28       Impact factor: 3.162

2.  Transcription in yeast activated by a putative amphipathic alpha helix linked to a DNA binding unit.

Authors:  E Giniger; M Ptashne
Journal:  Nature       Date:  1987 Dec 17-23       Impact factor: 49.962

3.  A new class of yeast transcriptional activators.

Authors:  J Ma; M Ptashne
Journal:  Cell       Date:  1987-10-09       Impact factor: 41.582

4.  Isolation of the gene encoding the Saccharomyces cerevisiae centromere-binding protein CP1.

Authors:  R E Baker; D C Masison
Journal:  Mol Cell Biol       Date:  1990-06       Impact factor: 4.272

5.  Functional domains of a positive regulatory protein, PHO4, for transcriptional control of the phosphatase regulon in Saccharomyces cerevisiae.

Authors:  N Ogawa; Y Oshima
Journal:  Mol Cell Biol       Date:  1990-05       Impact factor: 4.272

6.  Yeast centromere binding protein CBF1, of the helix-loop-helix protein family, is required for chromosome stability and methionine prototrophy.

Authors:  M Cai; R W Davis
Journal:  Cell       Date:  1990-05-04       Impact factor: 41.582

7.  CPF1, a yeast protein which functions in centromeres and promoters.

Authors:  J Mellor; W Jiang; M Funk; J Rathjen; C A Barnes; T Hinz; J H Hegemann; P Philippsen
Journal:  EMBO J       Date:  1990-12       Impact factor: 11.598

8.  Role of trans-activating proteins in the generation of active chromatin at the PHO5 promoter in S. cerevisiae.

Authors:  K D Fascher; J Schmitz; W Hörz
Journal:  EMBO J       Date:  1990-08       Impact factor: 11.598

9.  Nuclease hypersensitive regions with adjacent positioned nucleosomes mark the gene boundaries of the PHO5/PHO3 locus in yeast.

Authors:  A Almer; W Hörz
Journal:  EMBO J       Date:  1986-10       Impact factor: 11.598

10.  Alpha-helix in the carboxy-terminal domains of histones H1 and H5.

Authors:  D J Clark; C S Hill; S R Martin; J O Thomas
Journal:  EMBO J       Date:  1988-01       Impact factor: 11.598

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  14 in total

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Authors:  J C McDowell; A Dean
Journal:  Mol Cell Biol       Date:  1999-11       Impact factor: 4.272

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Authors:  D A Bergstrom; S J Tapscott
Journal:  Mol Cell Biol       Date:  2001-04       Impact factor: 4.272

3.  An activation-specific role for transcription factor TFIIB in vivo.

Authors:  W H Wu; M Hampsey
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

4.  Nucleosome retention and the stochastic nature of promoter chromatin remodeling for transcription.

Authors:  Hinrich Boeger; Joachim Griesenbeck; Roger D Kornberg
Journal:  Cell       Date:  2008-05-16       Impact factor: 41.582

5.  p65 Negatively regulates transcription of the cyclin E gene.

Authors:  Vaibhao C Janbandhu; Anup K Singh; Atish Mukherji; Vijay Kumar
Journal:  J Biol Chem       Date:  2010-04-11       Impact factor: 5.157

6.  A small ubiquitin-related modifier-interacting motif functions as the transcriptional activation domain of Krüppel-like factor 4.

Authors:  James X Du; Beth B McConnell; Vincent W Yang
Journal:  J Biol Chem       Date:  2010-06-28       Impact factor: 5.157

7.  A ligand binding domain mutation in the mouse glucocorticoid receptor functionally links chromatin remodeling and transcription initiation.

Authors:  L A Sheldon; C L Smith; J E Bodwell; A U Munck; G L Hager
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

8.  Transcription activator interactions with multiple SWI/SNF subunits.

Authors:  Kristen E Neely; Ahmed H Hassan; Christine E Brown; LeAnn Howe; Jerry L Workman
Journal:  Mol Cell Biol       Date:  2002-03       Impact factor: 4.272

9.  Genomic analysis of PIS1 gene expression.

Authors:  Mary E Gardocki; Margaret Bakewell; Deepa Kamath; Kelly Robinson; Kathy Borovicka; John M Lopes
Journal:  Eukaryot Cell       Date:  2005-03

10.  Occlusion of regulatory sequences by promoter nucleosomes in vivo.

Authors:  Changhui Mao; Christopher R Brown; Joachim Griesenbeck; Hinrich Boeger
Journal:  PLoS One       Date:  2011-03-03       Impact factor: 3.240

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