Literature DB >> 9740672

Analysis of distribution in the human, pig, and rat genomes points toward a general subtelomeric origin of minisatellite structures.

V Amarger1, D Gauguier, M Yerle, F Apiou, P Pinton, F Giraudeau, S Monfouilloux, M Lathrop, B Dutrillaux, J Buard, G Vergnaud.   

Abstract

We have developed approaches for the cloning of minisatellites from total genomic libraries and applied these approaches to the human, rat, and pig genomes. The chromosomal distribution of minisatellites in the three genomes is strikingly different, with clustering at chromosome ends in human, a seemingly almost even distribution in rat, and an intermediate situation in pig. A closer analysis, however, reveals that interstitial sites in pig and rat often correspond to terminal cytogenetic bands in human. This observation suggests that minisatellites are created toward chromosome ends and their internalization represents secondary events resulting from rearrangements involving chromosome ends. Copyright 1998 Academic Press.

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Year:  1998        PMID: 9740672     DOI: 10.1006/geno.1998.5365

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  10 in total

1.  Finding new human minisatellite sequences in the vicinity of long CA-rich sequences.

Authors:  F Giraudeau; E Petit; H Avet-Loiseau; Y Hauck; G Vergnaud; V Amarger
Journal:  Genome Res       Date:  1999-07       Impact factor: 9.043

2.  Meiotic recombination and flanking marker exchange at the highly unstable human minisatellite CEB1 (D2S90).

Authors:  J Buard; A C Shone; A J Jeffreys
Journal:  Am J Hum Genet       Date:  2000-06-26       Impact factor: 11.025

3.  Comparative sequence analysis of human minisatellites showing meiotic repeat instability.

Authors:  J Murray; J Buard; D L Neil; E Yeramian; K Tamaki; C Hollies; A J Jeffreys
Journal:  Genome Res       Date:  1999-02       Impact factor: 9.043

4.  Role of transposable elements in the propagation of minisatellites in the rice genome.

Authors:  T Inukai
Journal:  Mol Genet Genomics       Date:  2004-02-04       Impact factor: 3.291

5.  Comparative analyses of human single- and multilocus tandem repeats.

Authors:  Darren Ames; Nick Murphy; Tim Helentjaris; Nina Sun; Vicki Chandler
Journal:  Genetics       Date:  2008-06-18       Impact factor: 4.562

6.  Tandem amplification of a chromosomal segment harboring 5-enolpyruvylshikimate-3-phosphate synthase locus confers glyphosate resistance in Kochia scoparia.

Authors:  Mithila Jugulam; Kindsey Niehues; Amar S Godar; Dal-Hoe Koo; Tatiana Danilova; Bernd Friebe; Sunish Sehgal; Vijay K Varanasi; Andrew Wiersma; Philip Westra; Phillip W Stahlman; Bikram S Gill
Journal:  Plant Physiol       Date:  2014-07-18       Impact factor: 8.340

7.  Natural variation in a subtelomeric region of Arabidopsis: implications for the genomic dynamics of a chromosome end.

Authors:  Hui-Fen Kuo; Kenneth M Olsen; Eric J Richards
Journal:  Genetics       Date:  2006-03-17       Impact factor: 4.562

8.  Instability of the human minisatellite CEB1 in rad27Delta and dna2-1 replication-deficient yeast cells.

Authors:  Judith Lopes; Hélène Debrauwère; Jérôme Buard; Alain Nicolas
Journal:  EMBO J       Date:  2002-06-17       Impact factor: 11.598

9.  A draft annotation and overview of the human genome.

Authors:  F A Wright; W J Lemon; W D Zhao; R Sears; D Zhuo; J P Wang; H Y Yang; T Baer; D Stredney; J Spitzner; A Stutz; R Krahe; B Yuan
Journal:  Genome Biol       Date:  2001-07-04       Impact factor: 13.583

10.  Stimulation of gross chromosomal rearrangements by the human CEB1 and CEB25 minisatellites in Saccharomyces cerevisiae depends on G-quadruplexes or Cdc13.

Authors:  Aurèle Piazza; Alexandre Serero; Jean-Baptiste Boulé; Patricia Legoix-Né; Judith Lopes; Alain Nicolas
Journal:  PLoS Genet       Date:  2012-11-01       Impact factor: 5.917

  10 in total

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