Literature DB >> 9732454

The mouse gene encoding the testis-specific isoform of Poly(A) binding protein (Pabp2) is an expressed retroposon: intimations that gene expression in spermatogenic cells facilitates the creation of new genes.

K C Kleene1, E Mulligan, D Steiger, K Donohue, M A Mastrangelo.   

Abstract

The gene encoding the testis-specific isoform of mouse poly(A) binding protein (Pabp2) has been isolated and sequenced. Unexpectedly, comparison of the sequence of genomic and cDNAs demonstrated that the Pabp2 gene lacks introns, whereas all other functional Pabp genes in plants, amphibians, and mammals contain introns. Thus, the mouse Pabp2 gene is a retroposon, created by synthesizing a reverse transcriptase copy of a processed mRNA and inserting the copy into the genome. The Pabp2 retroposon is unusual because it is functional: previous work demonstrates that its promoter drives the accumulation of Pabp2 mRNA in meiotic and early haploid spermatogenic cells, and the Pabp2 mRNA encodes a protein whose size and RNA-binding specificities are characteristic of PABP in plants, yeast, and mammals (Kleene et al. 1994). Two novel factors can be implicated in the retention of function of the Pabp2 retroposon. First, the promoter of the Pabp2 gene is not derived from its intron-containing progenitor, Pabp1. Second, mRNAs encoding somatic PABP isoform, PABP1, are present at high levels in meiotic and haploid spermatogenic cells. Both features contrast with the phosphoglycerate kinase 2 retroposon, which is believed to compensate for the depletion of the somatic isoform due to X-chromosome inactivation in meiotic spermatogenic cells. We also document that more functional retroposons are expressed in meiotic and haploid spermatogenic cells than in any other tissue and speculate that transcriptional derepression in spermatogenic cells favors the creation of expressed retroposons.

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Year:  1998        PMID: 9732454     DOI: 10.1007/pl00006385

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  25 in total

1.  Human testis expresses a specific poly(A)-binding protein.

Authors:  C Féral; G Guellaën; A Pawlak
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

2.  Evolutionary fate of retroposed gene copies in the human genome.

Authors:  Nicolas Vinckenbosch; Isabelle Dupanloup; Henrik Kaessmann
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-21       Impact factor: 11.205

3.  A novel testis ubiquitin-binding protein gene arose by exon shuffling in hominoids.

Authors:  Daria V Babushok; Kazuhiko Ohshima; Eric M Ostertag; Xinsheng Chen; Yanfeng Wang; Prabhat K Mandal; Norihiro Okada; Charles S Abrams; Haig H Kazazian
Journal:  Genome Res       Date:  2007-07-10       Impact factor: 9.043

4.  Pseudogenes in the ENCODE regions: consensus annotation, analysis of transcription, and evolution.

Authors:  Deyou Zheng; Adam Frankish; Robert Baertsch; Philipp Kapranov; Alexandre Reymond; Siew Woh Choo; Yontao Lu; France Denoeud; Stylianos E Antonarakis; Michael Snyder; Yijun Ruan; Chia-Lin Wei; Thomas R Gingeras; Roderic Guigó; Jennifer Harrow; Mark B Gerstein
Journal:  Genome Res       Date:  2007-06       Impact factor: 9.043

5.  Cytoplasmic poly(A) binding protein C4 serves a critical role in erythroid differentiation.

Authors:  Hemant K Kini; Jian Kong; Stephen A Liebhaber
Journal:  Mol Cell Biol       Date:  2014-01-27       Impact factor: 4.272

Review 6.  Molecular biological features of male germ cell differentiation.

Authors:  Hiromitsu Tanaka; Mika Hirose; Keizo Tokuhiro; Hitoshi Tainaka; Yasushi Miyagawa; Akira Tsujimura; Akihiko Okuyama; Yoshitake Nishimune
Journal:  Reprod Med Biol       Date:  2007-02-16

Review 7.  Retroposition of processed pseudogenes: the impact of RNA stability and translational control.

Authors:  Adam Pavlicek; Andrew J Gentles; Jan Paces; Václav Paces; Jerzy Jurka
Journal:  Trends Genet       Date:  2005-12-13       Impact factor: 11.639

8.  Frequent and recent retrotransposition of orthologous genes plays a role in the evolution of sperm glycolytic enzymes.

Authors:  Soumya A Vemuganti; Fernando Pardo-Manuel de Villena; Deborah A O'Brien
Journal:  BMC Genomics       Date:  2010-05-06       Impact factor: 3.969

9.  Transcription of the rat testis-specific Rtdpoz-T1 and -T2 retrogenes during embryo development: co-transcription and frequent exonisation of transposable element sequences.

Authors:  Chiu-Jung Huang; Wan-Yi Lin; Che-Ming Chang; Kong-Bung Choo
Journal:  BMC Mol Biol       Date:  2009-07-25       Impact factor: 2.946

10.  Primate-specific spliced PMCHL RNAs are non-protein coding in human and macaque tissues.

Authors:  Sandra Schmieder; Fleur Darré-Toulemonde; Marie-Jeanne Arguel; Audrey Delerue-Audegond; Richard Christen; Jean-Louis Nahon
Journal:  BMC Evol Biol       Date:  2008-12-09       Impact factor: 3.260

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