Literature DB >> 9722560

Deconvolution of the fluorescence emission spectrum of human antithrombin and identification of the tryptophan residues that are responsive to heparin binding.

J L Meagher1, J M Beechem, S T Olson, P G Gettins.   

Abstract

Heparin causes an allosterically transmitted conformational change in the reactive center loop of antithrombin and a 40% enhancement of tryptophan fluorescence. We have expressed four human antithrombins containing single Trp --> Phe mutations and determined that the fluorescence of antithrombin is a linear combination of the four tryptophans. The contributions to the spectrum of native antithrombin at 340 nm were 8% for Trp-49, 10% for Trp-189, 19% for Trp-225, and 63% for Trp-307. Trp-225 and Trp-307 accounted for the majority of the heparin-induced fluorescence enhancement, contributing 37 and 36%, respectively. Trp-49 and Trp-225 underwent spectral shifts of 15 nm to blue and 5 nm to red, respectively, in the antithrombin-heparin complex. The blue shift for Trp-49 is consistent with partial burial by contact with heparin, whereas the red shift for Trp-225 and large enhancement probably result from increased solvent access upon heparin-induced displacement of the contact residue Ser-380. The enhancement for Trp-307 may result from the heparin-induced movement of helix H seen in the crystal structure. The time-resolved fluorescence properties of individual tryptophans of wild-type antithrombin were also determined using the four variants and showed that Trp-225 and Trp-307 experienced the largest change in lifetime upon heparin binding, providing support for the steady-state fluorescence deconvolution.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9722560     DOI: 10.1074/jbc.273.36.23283

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  18 in total

1.  Decomposition of protein tryptophan fluorescence spectra into log-normal components. II. The statistical proof of discreteness of tryptophan classes in proteins.

Authors:  Y K Reshetnyak; E A Burstein
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

2.  Hydration effects of heparin on antithrombin probed by osmotic stress.

Authors:  Maria P McGee; Jie Liang; James Luba
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

3.  Thr90Ser Mutation in Antithrombin is Associated with Recurrent Thrombosis in a Heterozygous Carrier.

Authors:  Yeling Lu; Bruno O Villoutreix; Indranil Biswas; Qiulan Ding; Xuefeng Wang; Alireza R Rezaie
Journal:  Thromb Haemost       Date:  2020-05-18       Impact factor: 5.249

Review 4.  Inhibitory serpins. New insights into their folding, polymerization, regulation and clearance.

Authors:  Peter G W Gettins; Steven T Olson
Journal:  Biochem J       Date:  2016-08-01       Impact factor: 3.857

5.  Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin III.

Authors:  Daniel C Pimenta; Iseli L Nantes; Eduardo S de Souza; Bernard Le Bonniec; Amando S Ito; Ivarne L S Tersariol; Vitor Oliveira; Maria A Juliano; Luiz Juliano
Journal:  Biochem J       Date:  2002-09-01       Impact factor: 3.857

6.  Kinetic evidence that allosteric activation of antithrombin by heparin is mediated by two sequential conformational changes.

Authors:  Sophia Schedin-Weiss; Benjamin Richard; Steven T Olson
Journal:  Arch Biochem Biophys       Date:  2010-09-15       Impact factor: 4.013

7.  Expression and functional characterization of two natural heparin-binding site variants of antithrombin.

Authors:  P Dinarvand; L Yang; B O Villoutreix; A R Rezaie
Journal:  J Thromb Haemost       Date:  2018-01-08       Impact factor: 5.824

8.  The pH sensitivity of murine heat shock protein 47 (HSP47) binding to collagen is affected by mutations in the breach histidine cluster.

Authors:  Mohd Firdaus Abdul-Wahab; Takayuki Homma; Michael Wright; Dee Olerenshaw; Timothy R Dafforn; Kazuhiro Nagata; Andrew D Miller
Journal:  J Biol Chem       Date:  2012-12-04       Impact factor: 5.157

9.  The critical role of hinge-region expulsion in the induced-fit heparin binding mechanism of antithrombin.

Authors:  Jonathan Langdown; Klara J Belzar; Wendy J Savory; Trevor P Baglin; James A Huntington
Journal:  J Mol Biol       Date:  2009-03-13       Impact factor: 5.469

10.  Conformational change in the chromatin remodelling protein MENT.

Authors:  Poh Chee Ong; Sarah J Golding; Mary C Pearce; James A Irving; Sergei A Grigoryev; Debbie Pike; Christopher G Langendorf; Tanya A Bashtannyk-Puhalovich; Stephen P Bottomley; James C Whisstock; Robert N Pike; Sheena McGowan
Journal:  PLoS One       Date:  2009-03-06       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.