Literature DB >> 9705438

Development of specific nested oligonucleotide PCR primers for the Streptococcus iniae 16S-23S ribosomal DNA intergenic spacer.

B R Berridge1, J D Fuller, J de Azavedo, D E Low, H Bercovier, P F Frelier.   

Abstract

Streptococcus iniae is a cause of septicemia, meningoencephalitis, and death in farmed fish and of cellulitis in human beings. A set of nested oligonucleotide PCR primers that specifically amplified a 373-bp subunit from a variety of clinical isolates from farmed fish and human patients were constructed from a 524-bp consensus sequence of the S. iniae 16S-23S ribosomal DNA intergenic spacer.

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Year:  1998        PMID： 9705438      PMCID： PMC105208     

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  16 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  The 16s/23s ribosomal spacer region as a target for DNA probes to identify eubacteria.

Authors:  T Barry; G Colleran; M Glennon; L K Dunican; F Gannon
Journal:  PCR Methods Appl       Date:  1991-08

Review 3.  DNA probes: a new role in diagnostic microbiology.

Authors:  J Walker; G Dougan
Journal:  J Appl Bacteriol       Date:  1989-09

4.  Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphisms.

Authors:  M A Jensen; J A Webster; N Straus
Journal:  Appl Environ Microbiol       Date:  1993-04       Impact factor: 4.792

5.  Transfer RNA genes between 16S and 23S rRNA genes in rRNA transcription units of E. coli.

Authors:  E Lund; J E Dahlberg; L Lindahl; S R Jaskunas; P P Dennis; M Nomura
Journal:  Cell       Date:  1976-02       Impact factor: 41.582

6.  Identification of staphylococcal and streptococcal causes of bovine mastitis using 16S-23S rRNA spacer regions.

Authors:  Pivi Forsman; Anu Tilsaia-Timisjrvi; Tapani Alatossava
Journal:  Microbiology (Reading)       Date:  1997-11       Impact factor: 2.777

7.  Typing of Staphylococcus aureus by amplification of the 16S-23S rRNA intergenic spacer sequences.

Authors:  L Dolzani; E Tonin; C Lagatolla; C Monti-Bragadin
Journal:  FEMS Microbiol Lett       Date:  1994-06-01       Impact factor: 2.742

8.  Heterogeneity among 16S-23S rRNA intergenic spacers of species within the 'Streptococcus milleri group'.

Authors:  R A Whiley; B Duke; J M Hardie; L M C Hall
Journal:  Microbiology (Reading)       Date:  1995-06       Impact factor: 2.777

9.  Rapid in situ hybridization technique using 16S rRNA segments for detecting and differentiating the closely related gram-positive organisms Bacillus polymyxa and Bacillus macerans.

Authors:  R J Jurtshuk; M Blick; J Bresser; G E Fox; P Jurtshuk
Journal:  Appl Environ Microbiol       Date:  1992-08       Impact factor: 4.792

10.  Development and use of species-specific oligonucleotide probes for differentiation of Streptococcus uberis and Streptococcus parauberis.

Authors:  R W Bentley; J A Leigh; M D Collins
Journal:  J Clin Microbiol       Date:  1993-01       Impact factor: 5.948
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  8 in total

1.  Comparison of two fingerprinting techniques, terminal restriction fragment length polymorphism and automated ribosomal intergenic spacer analysis, for determination of bacterial diversity in aquatic environments.

Authors:  R Danovaro; G M Luna; A Dell'anno; B Pietrangeli
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

2.  Diversity of lactic acid bacteria associated with fish and the fish farm environment, established by amplified rRNA gene restriction analysis.

Authors:  Christian Michel; Claire Pelletier; Mekki Boussaha; Diane-Gaëlle Douet; Armand Lautraite; Patrick Tailliez
Journal:  Appl Environ Microbiol       Date:  2007-03-02       Impact factor: 4.792

3.  Specific detection of Bradyrhizobium and Rhizobium strains colonizing rice (Oryza sativa) roots by 16S-23S ribosomal DNA intergenic spacer-targeted PCR.

Authors:  Z Tan; T Hurek; P Vinuesa; P Müller; J K Ladha; B Reinhold-Hurek
Journal:  Appl Environ Microbiol       Date:  2001-08       Impact factor: 4.792

4.  The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates.

Authors:  Erwin G Zoetendal; Jeroen Raes; Bartholomeus van den Bogert; Manimozhiyan Arumugam; Carien C G M Booijink; Freddy J Troost; Peer Bork; Michiel Wels; Willem M de Vos; Michiel Kleerebezem
Journal:  ISME J       Date:  2012-01-19       Impact factor: 10.302

5.  Host-directed evolution of a novel lactate oxidase in Streptococcus iniae isolates from barramundi (Lates calcarifer).

Authors:  Roslina A Nawawi; Justice C F Baiano; E Charlotte E Kvennefors; Andrew C Barnes
Journal:  Appl Environ Microbiol       Date:  2009-03-06       Impact factor: 4.792

6.  Streptococcus-zebrafish model of bacterial pathogenesis.

Authors:  Melody N Neely; John D Pfeifer; Michael Caparon
Journal:  Infect Immun       Date:  2002-07       Impact factor: 3.441

7.  Detection of and discrimination between gram-positive and gram-negative bacteria in intraocular samples by using nested PCR.

Authors:  N M Carroll; E E Jaeger; S Choudhury; A A Dunlop; M M Matheson; P Adamson; N Okhravi; S Lightman
Journal:  J Clin Microbiol       Date:  2000-05       Impact factor: 5.948

8.  Differential transcriptomic response in the spleen and head kidney following vaccination and infection of Asian seabass with Streptococcus iniae.

Authors:  Junhui Jiang; Masato Miyata; Candy Chan; Si Yan Ngoh; Woei Chang Liew; Jolly M Saju; Kah Sing Ng; Fong Sian Wong; Yeng Sheng Lee; Siow Foong Chang; László Orbán
Journal:  PLoS One       Date:  2014-07-03       Impact factor: 3.240
  8 in total

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