Literature DB >> 9696760

Insertion mutation of the form I cbbL gene encoding ribulose bisphosphate carboxylase/oxygenase (RuBisCO) in Thiobacillus neapolitanus results in expression of form II RuBisCO, loss of carboxysomes, and an increased CO2 requirement for growth.

S H Baker1, S Jin, H C Aldrich, G T Howard, J M Shively.   

Abstract

It has been previously established that Thiobacillus neapolitanus fixes CO2 by using a form I ribulose bisphosphate carboxylase/oxygenase (RuBisCO), that much of the enzyme is sequestered into carboxysomes, and that the genes for the enzyme, cbbL and cbbS, are part of a putative carboxysome operon. In the present study, cbbL and cbbS were cloned and sequenced. Analysis of RNA showed that cbbL and cbbS are cotranscribed on a message approximately 2,000 nucleotides in size. The insertion of a kanamycin resistance cartridge into cbbL resulted in a premature termination of transcription; a polar mutant was generated. The mutant is able to fix CO2, but requires a CO2 supplement for growth. Separation of cellular proteins from both the wild type and the mutant on sucrose gradients and subsequent analysis of the RuBisCO activity in the collected fractions showed that the mutant assimilates CO2 by using a form II RuBisCO. This was confirmed by immunoblot analysis using antibodies raised against form I and form II RuBisCOs. The mutant does not possess carboxysomes. Smaller, empty inclusions are present, but biochemical analysis indicates that if they are carboxysome related, they are not functional, i.e., do not contain RuBisCO. Northern analysis showed that some of the shell components of the carboxysome are produced, which may explain the presence of these inclusions in the mutant.

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Year:  1998        PMID: 9696760      PMCID: PMC107408     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  28 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1983-07       Impact factor: 11.205

3.  Cloning and sequencing of a form II ribulose-1,5-biphosphate carboxylase/oxygenase from the bacterial symbiont of the hydrothermal vent tubeworm Riftia pachyptila.

Authors:  J J Robinson; J L Stein; C M Cavanaugh
Journal:  J Bacteriol       Date:  1998-03       Impact factor: 3.490

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Journal:  Arch Microbiol       Date:  1984-07       Impact factor: 2.552

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Journal:  Gene       Date:  1982-10       Impact factor: 3.688

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Journal:  J Biol Chem       Date:  1974-06-10       Impact factor: 5.157

7.  Analysis of the cbbXYZ operon in Rhodobacter sphaeroides.

Authors:  J L Gibson; F R Tabita
Journal:  J Bacteriol       Date:  1997-02       Impact factor: 3.490

8.  Paracoccus thiocyanatus sp. nov., a new species of thiocyanate-utilizing facultative chemolithotroph, and transfer of Thiobacillus versutus to the genus Paracoccus as Paracoccus versutus comb. nov. with emendation of the genus.

Authors:  Yoko Katayama; Akira Hiraishi; Hiroshi Kuraishi
Journal:  Microbiology (Reading)       Date:  1995-06       Impact factor: 2.777

9.  Use of Electroporation To Generate a Thiobacillus neapolitanus Carboxysome Mutant.

Authors:  R S English; S Jin; J M Shively
Journal:  Appl Environ Microbiol       Date:  1995-09       Impact factor: 4.792

10.  Evidence that some dinoflagellates contain a ribulose-1,5-bisphosphate carboxylase/oxygenase related to that of the alpha-proteobacteria.

Authors:  S M Whitney; D C Shaw; D Yellowlees
Journal:  Proc Biol Sci       Date:  1995-03-22       Impact factor: 5.349

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  18 in total

Review 1.  Microcompartments in prokaryotes: carboxysomes and related polyhedra.

Authors:  G C Cannon; C E Bradburne; H C Aldrich; S H Baker; S Heinhorst; J M Shively
Journal:  Appl Environ Microbiol       Date:  2001-12       Impact factor: 4.792

2.  A novel evolutionary lineage of carbonic anhydrase (epsilon class) is a component of the carboxysome shell.

Authors:  Anthony K-C So; George S Espie; Eric B Williams; Jessup M Shively; Sabine Heinhorst; Gordon C Cannon
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

3.  CO2-responsive expression and gene organization of three ribulose-1,5-bisphosphate carboxylase/oxygenase enzymes and carboxysomes in Hydrogenovibrio marinus strain MH-110.

Authors:  Yoichi Yoshizawa; Koichi Toyoda; Hiroyuki Arai; Masaharu Ishii; Yasuo Igarashi
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

Review 4.  Functions, compositions, and evolution of the two types of carboxysomes: polyhedral microcompartments that facilitate CO2 fixation in cyanobacteria and some proteobacteria.

Authors:  Benjamin D Rae; Benedict M Long; Murray R Badger; G Dean Price
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

5.  Development of a genetic system for the chemolithoautotrophic bacterium Thiobacillus denitrificans.

Authors:  Tracy E Letain; Staci R Kane; Tina C Legler; Edmund P Salazar; Peter G Agron; Harry R Beller
Journal:  Appl Environ Microbiol       Date:  2007-03-02       Impact factor: 4.792

6.  The 17-gene ethanolamine (eut) operon of Salmonella typhimurium encodes five homologues of carboxysome shell proteins.

Authors:  E Kofoid; C Rappleye; I Stojiljkovic; J Roth
Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

7.  Functional reconstitution of a bacterial CO2 concentrating mechanism in Escherichia coli.

Authors:  Avi I Flamholz; Eli Dugan; Cecilia Blikstad; Shmuel Gleizer; Roee Ben-Nissan; Shira Amram; Niv Antonovsky; Sumedha Ravishankar; Elad Noor; Arren Bar-Even; Ron Milo; David F Savage
Journal:  Elife       Date:  2020-10-21       Impact factor: 8.140

8.  Organization, structure, and assembly of alpha-carboxysomes determined by electron cryotomography of intact cells.

Authors:  Cristina V Iancu; Dylan M Morris; Zhicheng Dou; Sabine Heinhorst; Gordon C Cannon; Grant J Jensen
Journal:  J Mol Biol       Date:  2009-11-17       Impact factor: 5.469

9.  Exploring the oxygenase function of Form II Rubisco for production of glycolate from CO2.

Authors:  Fan Yang; Junli Zhang; Zhen Cai; Jie Zhou; Yin Li
Journal:  AMB Express       Date:  2021-05-08       Impact factor: 3.298

10.  The pentameric vertex proteins are necessary for the icosahedral carboxysome shell to function as a CO2 leakage barrier.

Authors:  Fei Cai; Balaraj B Menon; Gordon C Cannon; Kenneth J Curry; Jessup M Shively; Sabine Heinhorst
Journal:  PLoS One       Date:  2009-10-21       Impact factor: 3.240

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