Literature DB >> 9685178

How protein reads the stop codon and terminates translation.

Y Nakamura1, K Ito.   

Abstract

Translation termination requires two codon-specific protein-release factors in prokaryotes and one factor in eukaryotes. The underlying mechanism for stop codon recognition, as well as the biological meaning of the conservation of one or two release factors in the evolutionary kingdoms, are not known. The recent discovery of release factor genes and the molecular mimicry between translational factors and tRNA provide us with clues to the mechanisms of how proteins read the stop codon and terminate translation, shedding some light on the evolutionary aspect of release factors.

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Year:  1998        PMID: 9685178     DOI: 10.1046/j.1365-2443.1998.00191.x

Source DB:  PubMed          Journal:  Genes Cells        ISSN: 1356-9597            Impact factor:   1.891


  29 in total

1.  Translation termination in eukaryotes: polypeptide release factor eRF1 is composed of functionally and structurally distinct domains.

Authors:  L Y Frolova; T I Merkulova; L L Kisselev
Journal:  RNA       Date:  2000-03       Impact factor: 4.942

2.  One protein from two open reading frames: mechanism of a 50 nt translational bypass.

Authors:  A J Herr; R F Gesteland; J F Atkins
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

3.  The ribosomal binding and peptidyl-tRNA hydrolysis functions of Escherichia coli release factor 2 are linked through residue 246.

Authors:  D N Wilson; D Guévremont; W P Tate
Journal:  RNA       Date:  2000-12       Impact factor: 4.942

4.  Suppression of eukaryotic translation termination by selected RNAs.

Authors:  J Carnes; L Frolova; S Zinnen; G Drugeon; M Phillippe; J Justesen; A L Haenni; L Leinwand; L L Kisselev; M Yarus
Journal:  RNA       Date:  2000-10       Impact factor: 4.942

5.  Crystal structure combined with genetic analysis of the Thermus thermophilus ribosome recycling factor shows that a flexible hinge may act as a functional switch.

Authors:  T Toyoda; O F Tin; K Ito; T Fujiwara; T Kumasaka; M Yamamoto; M B Garber; Y Nakamura
Journal:  RNA       Date:  2000-10       Impact factor: 4.942

6.  A peptide chain release factor 2 affects the stability of UGA-containing transcripts in Arabidopsis chloroplasts.

Authors:  Jörg Meurer; Lina Lezhneva; Katrin Amann; Manfred Gödel; Staver Bezhani; Irena Sherameti; Ralf Oelmüller
Journal:  Plant Cell       Date:  2002-12       Impact factor: 11.277

Review 7.  Termination of translation: interplay of mRNA, rRNAs and release factors?

Authors:  Lev Kisselev; Måns Ehrenberg; Ludmila Frolova
Journal:  EMBO J       Date:  2003-01-15       Impact factor: 11.598

Review 8.  Evolutionary conservation of reactions in translation.

Authors:  M Clelia Ganoza; Michael C Kiel; Hiroyuki Aoki
Journal:  Microbiol Mol Biol Rev       Date:  2002-09       Impact factor: 11.056

9.  Antizyme frameshifting as a functional probe of eukaryotic translational termination.

Authors:  Zemfira N Karamysheva; Andrey L Karamyshev; Koichi Ito; Takashi Yokogawa; Kazuya Nishikawa; Yoshikazu Nakamura; Senya Matsufuji
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

10.  GTP hydrolysis by eRF3 facilitates stop codon decoding during eukaryotic translation termination.

Authors:  Joe Salas-Marco; David M Bedwell
Journal:  Mol Cell Biol       Date:  2004-09       Impact factor: 4.272

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