Literature DB >> 9679200

An 8 kb nucleotide sequence at the 3' flanking region of the sspC gene (184 degrees) on the Bacillus subtilis 168 chromosome containing an intein and an intron.

S Y Ghim1, S K Choi, B S Shin, S H Park.   

Abstract

As part of the Bacillus subtilis genome sequencing project, we determined the complete nucleotide sequence of an 8000-bp fragment downstream of the sspC gene (184 degrees) of the B. subtilis 168 chromosome. The sequence analysis shows that the sspC gene is located inside of the SP beta region, which differs from the current genetic map of B. subtilis 168. This region contains 12 putative ORFs (yojQ through yojZ and sspC). A homology search for the deduced products of the ORFs shows significant similarities to enzymes involved in deoxyribonucleotide metabolism: ribonucleotide reductase (Nrd) E, NrdF, thioredoxin and dUTPase. Interestingly, this DNA fragment includes two split genes, yojP containing conserved motifs of an intein and yojQ and yojS with an 808-bp intervening sequence for a putative intron structure. In addition, the yojR gene includes a putative new DNA replication terminator.

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Year:  1998        PMID: 9679200     DOI: 10.1093/dnares/5.2.121

Source DB:  PubMed          Journal:  DNA Res        ISSN: 1340-2838            Impact factor:   4.458


  3 in total

1.  Evolution and horizontal transfer of dUTPase-encoding genes in viruses and their hosts.

Authors:  A M Baldo; M A McClure
Journal:  J Virol       Date:  1999-09       Impact factor: 5.103

2.  Bacterial thymidylate synthase with intein, group II Intron, and distinctive ThyX motifs.

Authors:  Xiang-Qin Liu; Jing Yang
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

3.  Algal viruses with distinct intraspecies host specificities include identical intein elements.

Authors:  Keizo Nagasaki; Yoko Shirai; Yuji Tomaru; Kensho Nishida; Shmuel Pietrokovski
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

  3 in total

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