Literature DB >> 9671561

Recommendations for the presentation of NMR structures of proteins and nucleic acids.

J L Markley1, A Bax, Y Arata, C W Hilbers, R Kaptein, B D Sykes, P E Wright, K Wüthrich.   

Abstract

The recommendations presented here are designed to support easier communication of NMR data and NMR structures of proteins and nucleic acids through unified nomenclature and reporting standards. Much of this document pertains to the reporting of data in journal articles; however, in the interest of the future development of structural biology, it is desirable that the bulk of the reported information be stored in computer-accessible form and be freely accessible to the scientific community in standardized formats for data exchange. These recommendations stem from an IUPAC-IUBMB-IUPAB inter-union venture with the direct involvement of ICSU and CODATA. The Task Group has reviewed previous formal recommendations and has extended them in the light of more recent developments in the field of biomolecular NMR spectroscopy. Drafts of the recommendations presented here have been examined critically by more than 50 specialists in the field and have gone through two rounds of extensive modification to incorporate suggestions and criticisms. Copyright 1998 Academic Press.

Mesh:

Substances:

Year:  1998        PMID: 9671561     DOI: 10.1006/jmbi.1998.1852

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  79 in total

1.  Sequential assignment and secondary structure analysis of the NADP(H)-binding domain of Escherichia coli transhydrogenase.

Authors:  C Johansson; A Bergkvist; O Fjellström; J Rydström; B G Karlsson
Journal:  J Biomol NMR       Date:  1999-07       Impact factor: 2.835

2.  Assignment of cytosine N3 resonances in nucleic acids via intrabase three-bond coupling to amino protons.

Authors:  S Rüdisser; J G Pelton; I Tinoco
Journal:  J Biomol NMR       Date:  1999-10       Impact factor: 2.835

3.  The solution structure of the Zalpha domain of the human RNA editing enzyme ADAR1 reveals a prepositioned binding surface for Z-DNA.

Authors:  M Schade; C J Turner; R Kühne; P Schmieder; K Lowenhaupt; A Herbert; A Rich; H Oschkinat
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

4.  Dynamic nuclear polarization-enhanced solid-state NMR spectroscopy of GNNQQNY nanocrystals and amyloid fibrils.

Authors:  Galia T Debelouchina; Marvin J Bayro; Patrick C A van der Wel; Marc A Caporini; Alexander B Barnes; Melanie Rosay; Werner E Maas; Robert G Griffin
Journal:  Phys Chem Chem Phys       Date:  2010-05-08       Impact factor: 3.676

5.  NMR structure of ubiquitin-like domain in PARKIN: gene product of familial Parkinson's disease.

Authors:  Mitsuru Tashiro; Seiji Okubo; Sakurako Shimotakahara; Hideki Hatanaka; Hideyo Yasuda; Masatsune Kainosho; Shigeyuki Yokoyama; Heisaburo Shindo
Journal:  J Biomol NMR       Date:  2003-02       Impact factor: 2.835

6.  Similarities between intra- and intermolecular hydrogen bonds in RNA kissing complexes found by means of cross-correlated relaxation.

Authors:  Jens Dittmer; Chul-Hyun Kim; Geoffrey Bodenhausen
Journal:  J Biomol NMR       Date:  2003-07       Impact factor: 2.835

7.  Solution structure of hypothetical protein TA1414 from Thermoplasma acidophilum.

Authors:  Daniel Monleón; Adelinda Yee; Chen Song Liu; Cheryl Arrowsmith; Bernardo Celda
Journal:  J Biomol NMR       Date:  2004-01       Impact factor: 2.835

8.  Synthesis, characterization and solution structure of tethered oligonucleotides containing an internal 3'-phosphoglycolate, 5'-phosphate gapped lesion.

Authors:  Hans-Dieter Junker; Silvia T Hoehn; Richard C Bunt; Vasilios Marathius; Jingyang Chen; Christopher J Turner; JoAnne Stubbe
Journal:  Nucleic Acids Res       Date:  2002-12-15       Impact factor: 16.971

9.  Delineation and analysis of the conceptual data model implied by the "IUPAC Recommendations for Biochemical Nomenclature".

Authors:  Susan Fox-Erlich; Timothy O Martyn; Heidi J C Ellis; Michael R Gryk
Journal:  Protein Sci       Date:  2004-08-04       Impact factor: 6.725

10.  Hydramacin-1 in action: scrutinizing the barnacle model.

Authors:  Matthias Michalek; Bruno Vincent; Rainer Podschun; Joachim Grötzinger; Burkhard Bechinger; Sascha Jung
Journal:  Antimicrob Agents Chemother       Date:  2013-04-15       Impact factor: 5.191

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.