Literature DB >> 9667991

Assessing the relative contribution of molecular and morphological characters in simultaneous analysis trees.

R H Baker1, X Yu, R DeSalle.   

Abstract

We examined the contribution of morphological and molecular character information for 15 systematics studies in which these two kinds of data were used in combined or simultaneous analyses. Assessment of the disagreement between these data sources, as measured by the incongruence length difference, reveals substantial conflict for the studies surveyed. In addition, the partitioned Bremer support was used to measure the degree of support provided by each data partition when analyzed together. Despite the significant incongruence found for nearly half the studies, the PBS indices suggest both types of data contribute positively to the combined analyses and that, when standardized by the number of phylogenetically informative characters, morphology data generally provide equal or greater support than do the molecular data. This result, combined with the fact that morphological characters generally exhibit higher consistency, indicates that this source of character information continues to be useful in systematics studies despite the increasing volume of available molecular data. Copyright 1998 Academic Press.

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Year:  1998        PMID: 9667991     DOI: 10.1006/mpev.1998.0519

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  18 in total

1.  A phylogenetic hypothesis for passerine birds: taxonomic and biogeographic implications of an analysis of nuclear DNA sequence data.

Authors:  F Keith Barker; George F Barrowclough; Jeff G Groth
Journal:  Proc Biol Sci       Date:  2002-02-07       Impact factor: 5.349

2.  Phylogenetic analysis of pelecaniformes (aves) based on osteological data: implications for waterbird phylogeny and fossil calibration studies.

Authors:  Nathan D Smith
Journal:  PLoS One       Date:  2010-10-14       Impact factor: 3.240

Review 3.  The unholy trinity: taxonomy, species delimitation and DNA barcoding.

Authors:  Rob DeSalle; Mary G Egan; Mark Siddall
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-10-29       Impact factor: 6.237

4.  Synergistic effects of combining morphological and molecular data in resolving the phylogeny of butterflies and skippers.

Authors:  Niklas Wahlberg; Michael F Braby; Andrew V Z Brower; Rienk de Jong; Ming-Min Lee; Sören Nylin; Naomi E Pierce; Felix A H Sperling; Roger Vila; Andrew D Warren; Evgueni Zakharov
Journal:  Proc Biol Sci       Date:  2005-08-07       Impact factor: 5.349

5.  Origins of host-specific populations of the blast pathogen Magnaporthe oryzae in crop domestication with subsequent expansion of pandemic clones on rice and weeds of rice.

Authors:  Brett C Couch; Isabelle Fudal; Marc-Henri Lebrun; Didier Tharreau; Barbara Valent; Pham van Kim; Jean-Loup Nottéghem; Linda M Kohn
Journal:  Genetics       Date:  2005-03-31       Impact factor: 4.562

6.  An improved phylogeny of the Andean tit-tyrants (Aves, Tyrannidae): more characters trump sophisticated analyses.

Authors:  Shane G Dubay; Christopher C Witt
Journal:  Mol Phylogenet Evol       Date:  2012-04-16       Impact factor: 4.286

7.  Higher-order phylogeny of modern birds (Theropoda, Aves: Neornithes) based on comparative anatomy. II. Analysis and discussion.

Authors:  Bradley C Livezey; Richard L Zusi
Journal:  Zool J Linn Soc       Date:  2007-01-01       Impact factor: 3.286

8.  Revised phylogenetic analysis of the Aetosauria (Archosauria: Pseudosuchia); assessing the effects of incongruent morphological character sets.

Authors:  William G Parker
Journal:  PeerJ       Date:  2016-01-21       Impact factor: 2.984

9.  Diversity of Termitomyces associated with fungus-farming termites assessed by cultural and culture-independent methods.

Authors:  Huxley M Makonde; Hamadi I Boga; Zipporah Osiemo; Romano Mwirichia; J Benjamin Stielow; Markus Göker; Hans-Peter Klenk
Journal:  PLoS One       Date:  2013-02-20       Impact factor: 3.240

10.  Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling.

Authors:  Claudio Oliveira; Gleisy S Avelino; Kelly T Abe; Tatiane C Mariguela; Ricardo C Benine; Guillermo Ortí; Richard P Vari; Ricardo M Corrêa e Castro
Journal:  BMC Evol Biol       Date:  2011-09-26       Impact factor: 3.260

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