Literature DB >> 9666329

Repeats in genomic DNA: mining and meaning.

J Jurka1.   

Abstract

For hundreds of millions of years, perhaps from the very beginning of their evolutionary history, eukaryotic cells have been habitats and junkyards for countless generations of transposable elements, preserved in repetitive DNA sequences. Analysis of these sequences, combined with experimental research, reveals a history of complex 'intracellular ecosystems' of transposable elements that are inseparably associated with genomic evolution.

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Year:  1998        PMID： 9666329     DOI： 10.1016/s0959-440x(98)80067-5

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN： 0959-440X            Impact factor:   6.809


  111 in total

1.  Long inverted repeats are an at-risk motif for recombination in mammalian cells.

Authors:  A S Waldman; H Tran; E C Goldsmith; M A Resnick
Journal:  Genetics       Date:  1999-12       Impact factor: 4.562

2.  UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs.

Authors:  G Pesole; S Liuni; G Grillo; F Licciulli; A Larizza; W Makalowski; C Saccone
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

3.  High spontaneous mutation rate in the hyperthermophilic archaeon Sulfolobus solfataricus is mediated by transposable elements.

Authors:  E Martusewitsch; C W Sensen; C Schleper
Journal:  J Bacteriol       Date:  2000-05       Impact factor: 3.490

4.  Breaking away from home.

Authors:  L D Hudson
Journal:  Am J Hum Genet       Date:  2000-05-25       Impact factor: 11.025

5.  Gene2EST: a BLAST2 server for searching expressed sequence tag (EST) databases with eukaryotic gene-sized queries.

Authors:  C Gemünd; C Ramu; B Altenberg-Greulich; T J Gibson
Journal:  Nucleic Acids Res       Date:  2001-03-15       Impact factor: 16.971

6.  Mosaic structure of the DNA molecules of the human chromosomes 21 and 22.

Authors:  D Häring; J Kypr
Journal:  Mol Biol Rep       Date:  2001-03       Impact factor: 2.316

7.  HERVd: database of human endogenous retroviruses.

Authors:  Jan Paces; Adam Pavlícek; Václav Paces
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

8.  Processed pseudogenes of human endogenous retroviruses generated by LINEs: their integration, stability, and distribution.

Authors:  Adam Pavlícek; Jan Paces; Daniel Elleder; Jirí Hejnar
Journal:  Genome Res       Date:  2002-03       Impact factor: 9.043

9.  Sequence-based design of single-copy genomic DNA probes for fluorescence in situ hybridization.

Authors:  P K Rogan; P M Cazcarro; J H Knoll
Journal:  Genome Res       Date:  2001-06       Impact factor: 9.043

Review 10.  Genetic and epigenetic interactions in allopolyploid plants.

Authors:  L Comai
Journal:  Plant Mol Biol       Date:  2000-06       Impact factor: 4.076
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