Literature DB >> 9655827

Crystal structures of reduced and oxidized DsbA: investigation of domain motion and thiolate stabilization.

L W Guddat1, J C Bardwell, J L Martin.   

Abstract

BACKGROUND: The redox proteins that incorporate a thioredoxin fold have diverse properties and functions. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyzes disulfide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilizing active-site interactions in the reduced form. In the domain motion model, hinge bending between the two domains of DsbA occurs as a result of redox-related conformational changes.
RESULTS: We have determined the crystal structures of reduced and oxidized DsbA in the same crystal form and at the same pH (5.6). The crystal structure of a lower pH form of oxidized DsbA has also been determined (pH 5.0). These new crystal structures of DsbA, and the previously determined structure of oxidized DsbA at pH 6.5, provide the foundation for analysis of structural changes that occur upon reduction of the active-site disulfide bond.
CONCLUSIONS: The structures of reduced and oxidized DsbA reveal that hinge bending motions do occur between the two domains. These motions are independent of redox state, however, and therefore do not contribute to the energetic differences between the two redox states. Instead, the observed domain motion is proposed to be a consequence of substrate binding. Furthermore, DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulfide at the active site.

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Year:  1998        PMID: 9655827     DOI: 10.1016/s0969-2126(98)00077-x

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  45 in total

1.  Solution nuclear magnetic resonance structure of a protein disulfide oxidoreductase from Methanococcus jannaschii.

Authors:  J W Cave; H S Cho; A M Batchelder; H Yokota; R Kim; D E Wemmer
Journal:  Protein Sci       Date:  2001-02       Impact factor: 6.725

2.  On the functional interchangeability, oxidant versus reductant, of members of the thioredoxin superfamily.

Authors:  L Debarbieux; J Beckwith
Journal:  J Bacteriol       Date:  2000-02       Impact factor: 3.490

3.  Description of the topographical changes associated to the different stages of the DsbA catalytic cycle.

Authors:  Floriana Vinci; Joël Couprie; Piero Pucci; Eric Quéméneur; Mireille Moutiez
Journal:  Protein Sci       Date:  2002-07       Impact factor: 6.725

4.  All intermediates of the arsenate reductase mechanism, including an intramolecular dynamic disulfide cascade.

Authors:  Joris Messens; José C Martins; Karolien Van Belle; Elke Brosens; Aline Desmyter; Marjan De Gieter; Jean-Michel Wieruszeski; Rudolph Willem; Lode Wyns; Ingrid Zegers
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-18       Impact factor: 11.205

5.  Crystal structures of the DsbG disulfide isomerase reveal an unstable disulfide.

Authors:  Begoña Heras; Melissa A Edeling; Horst J Schirra; Satish Raina; Jennifer L Martin
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-07       Impact factor: 11.205

6.  Prediction of pKa and redox properties in the thioredoxin superfamily.

Authors:  Efrosini Moutevelis; Jim Warwicker
Journal:  Protein Sci       Date:  2004-08-31       Impact factor: 6.725

7.  Electrostatics of cysteine residues in proteins: parameterization and validation of a simple model.

Authors:  Freddie R Salsbury; Leslie B Poole; Jacquelyn S Fetrow
Journal:  Proteins       Date:  2012-08-21

8.  Crystal structure of reduced thioredoxin reductase from Escherichia coli: structural flexibility in the isoalloxazine ring of the flavin adenine dinucleotide cofactor.

Authors:  B W Lennon; C H Williams; M L Ludwig
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

9.  High resolution NMR spectroscopy of nanocrystalline proteins at ultra-high magnetic field.

Authors:  Lindsay J Sperling; Andrew J Nieuwkoop; Andrew S Lipton; Deborah A Berthold; Chad M Rienstra
Journal:  J Biomol NMR       Date:  2009-12-02       Impact factor: 2.835

10.  Improved pKa calculations through flexibility based sampling of a water-dominated interaction scheme.

Authors:  Jim Warwicker
Journal:  Protein Sci       Date:  2004-10       Impact factor: 6.725

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