Literature DB >> 9655330

Circular permutation of betaB2-crystallin changes the hierarchy of domain assembly.

G Wright1, A K Basak, K Wieligmann, E M Mayr, C Slingsby.   

Abstract

The betagamma-crystallins form a superfamily of eye lens proteins comprised of multiple Greek motifs that are symmetrically organized into domains and higher assemblies. In the betaB2-crystallin dimer each polypeptide folds into two similar domains that are related to monomeric gamma-crystallin by domain swapping. The crystal structure of the circularly permuted two-domain betaB2 polypeptide shows that permutation converts intermolecular domain pairing into intramolecular pairing. However, the dimeric permuted protein is, in fact, half a native tetramer. This result shows how the sequential order of domains in multi-domain proteins can affect quaternary domain assembly.

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Year:  1998        PMID: 9655330      PMCID: PMC2144035          DOI: 10.1002/pro.5560070602

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  20 in total

1.  X-ray analysis of beta B2-crystallin and evolution of oligomeric lens proteins.

Authors:  B Bax; R Lapatto; V Nalini; H Driessen; P F Lindley; D Mahadevan; T L Blundell; C Slingsby
Journal:  Nature       Date:  1990-10-25       Impact factor: 49.962

2.  Structure of oligomeric beta B2-crystallin: an application of the T2 translation function to an asymmetric unit containing two dimers.

Authors:  H P Driessen; B Bax; C Slingsby; P F Lindley; D Mahadevan; D S Moss; I J Tickle
Journal:  Acta Crystallogr B       Date:  1991-12-01

Review 3.  Three-dimensional domain duplication, swapping and stealing.

Authors:  J Heringa; W R Taylor
Journal:  Curr Opin Struct Biol       Date:  1997-06       Impact factor: 6.809

4.  Picture story. An eye on crystallins.

Authors:  N J Clout; C Slingsby; G J Wistow
Journal:  Nat Struct Biol       Date:  1997-09

Review 5.  Lens crystallins: the evolution and expression of proteins for a highly specialized tissue.

Authors:  G J Wistow; J Piatigorsky
Journal:  Annu Rev Biochem       Date:  1988       Impact factor: 23.643

6.  The exon theory of genes.

Authors:  W Gilbert
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1987

7.  Quaternary interactions in eye lens beta-crystallins: basic and acidic subunits of beta-crystallins favor heterologous association.

Authors:  C Slingsby; O A Bateman
Journal:  Biochemistry       Date:  1990-07-17       Impact factor: 3.162

8.  SETOR: hardware-lighted three-dimensional solid model representations of macromolecules.

Authors:  S V Evans
Journal:  J Mol Graph       Date:  1993-06

9.  The molecular structure and stability of the eye lens: x-ray analysis of gamma-crystallin II.

Authors:  T Blundell; P Lindley; L Miller; D Moss; C Slingsby; I Tickle; B Turnell; G Wistow
Journal:  Nature       Date:  1981-02-26       Impact factor: 49.962

10.  Proline-dependent oligomerization with arm exchange.

Authors:  M Bergdoll; M H Remy; C Cagnon; J M Masson; P Dumas
Journal:  Structure       Date:  1997-03-15       Impact factor: 5.006

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  9 in total

1.  In vivo assembly of aspartate transcarbamoylase from fragmented and circularly permuted catalytic polypeptide chains.

Authors:  X Ni; H K Schachman
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

2.  Crystal structure of truncated human betaB1-crystallin.

Authors:  Rob L M Van Montfort; Orval A Bateman; Nicolette H Lubsen; Christine Slingsby
Journal:  Protein Sci       Date:  2003-11       Impact factor: 6.725

Review 3.  Protein reconstitution and three-dimensional domain swapping: benefits and constraints of covalency.

Authors:  Jannette Carey; Stina Lindman; Mikael Bauer; Sara Linse
Journal:  Protein Sci       Date:  2007-11       Impact factor: 6.725

Review 4.  Evolution of crystallins for a role in the vertebrate eye lens.

Authors:  Christine Slingsby; Graeme J Wistow; Alice R Clark
Journal:  Protein Sci       Date:  2013-02-26       Impact factor: 6.725

5.  Laser light-scattering evidence for an altered association of beta B1-crystallin deamidated in the connecting peptide.

Authors:  Michael J Harms; Philip A Wilmarth; Deborah M Kapfer; Eric A Steel; Larry L David; Hans Peter Bächinger; Kirsten J Lampi
Journal:  Protein Sci       Date:  2004-03       Impact factor: 6.725

6.  Primary sequence contribution to the optical function of the eye lens.

Authors:  K Mahendiran; C Elie; J-C Nebel; A Ryan; B K Pierscionek
Journal:  Sci Rep       Date:  2014-06-06       Impact factor: 4.379

7.  Discovering the Ultimate Limits of Protein Secondary Structure Prediction.

Authors:  Chia-Tzu Ho; Yu-Wei Huang; Teng-Ruei Chen; Chia-Hua Lo; Wei-Cheng Lo
Journal:  Biomolecules       Date:  2021-11-03

8.  A comprehensive analysis of non-sequential alignments between all protein structures.

Authors:  Alexej Abyzov; Valentin A Ilyin
Journal:  BMC Struct Biol       Date:  2007-11-16

9.  A secondary structure-based position-specific scoring matrix applied to the improvement in protein secondary structure prediction.

Authors:  Teng-Ruei Chen; Sheng-Hung Juan; Yu-Wei Huang; Yen-Cheng Lin; Wei-Cheng Lo
Journal:  PLoS One       Date:  2021-07-28       Impact factor: 3.240

  9 in total

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