Literature DB >> 9653136

Lipid nanotubes as substrates for helical crystallization of macromolecules.

E M Wilson-Kubalek1, R E Brown, H Celia, R A Milligan.   

Abstract

A general approach for crystallization of proteins in a fast and simple manner would be of immense interest to biologists studying protein structure-function relationships. Here, we describe a method that we have developed for promoting the formation of helical arrays of proteins and macromolecular assemblies. Electron micrographs of the arrays are suitable for helical image analysis and three-dimensional reconstruction. We show that hydrated mixtures of the glycolipid galactosylceramide (GalCer) and derivatized lipids or charged lipids form unilamellar nanotubules. The tubules bind proteins in a specific manner via high affinity ligands on the polar head groups of the lipid or via electrostatic interactions. By doping the GalCer with a novel nickel-containing lipid, we have been able to form helical arrays of two histidine-tagged proteins. Similarly, doping with a biotinylated lipid allows crystallization of streptavidin. Finally, three proteins with affinity for positively or negatively charged lipid layers formed helical arrays on appropriately charged tubules. The generality of this method may allow a wide variety of proteins to be crystallized on lipid nanotubes under physiological conditions.

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Year:  1998        PMID: 9653136      PMCID: PMC20925          DOI: 10.1073/pnas.95.14.8040

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

1.  Sub-domain structure of lipid-bound annexin-V resolved by electron image analysis.

Authors:  G Mosser; C Ravanat; J M Freyssinet; A Brisson
Journal:  J Mol Biol       Date:  1991-01-20       Impact factor: 5.469

2.  Visualization of a 4-helix bundle in the hepatitis B virus capsid by cryo-electron microscopy.

Authors:  J F Conway; N Cheng; A Zlotnick; P T Wingfield; S J Stahl; A C Steven
Journal:  Nature       Date:  1997-03-06       Impact factor: 49.962

3.  Phage display of intact domains at high copy number: a system based on SOC, the small outer capsid protein of bacteriophage T4.

Authors:  Z J Ren; G K Lewis; P T Wingfield; E G Locke; A C Steven; L W Black
Journal:  Protein Sci       Date:  1996-09       Impact factor: 6.725

4.  The 70S Escherichia coli ribosome at 23 A resolution: fitting the ribosomal RNA.

Authors:  H Stark; F Mueller; E V Orlova; M Schatz; P Dube; T Erdemir; F Zemlin; R Brimacombe; M van Heel
Journal:  Structure       Date:  1995-08-15       Impact factor: 5.006

5.  In vitro evolution of a neutralizing human antibody to human immunodeficiency virus type 1 to enhance affinity and broaden strain cross-reactivity.

Authors:  C F Barbas; D Hu; N Dunlop; L Sawyer; D Cababa; R M Hendry; P L Nara; D R Burton
Journal:  Proc Natl Acad Sci U S A       Date:  1994-04-26       Impact factor: 11.205

6.  Acetylcholine receptor channel imaged in the open state.

Authors:  N Unwin
Journal:  Nature       Date:  1995-01-05       Impact factor: 49.962

7.  Atomic model of plant light-harvesting complex by electron crystallography.

Authors:  W Kühlbrandt; D N Wang; Y Fujiyoshi
Journal:  Nature       Date:  1994-02-17       Impact factor: 49.962

8.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

Authors:  R Henderson; J M Baldwin; T A Ceska; F Zemlin; E Beckmann; K H Downing
Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

9.  Visualization of alpha-helices in tobacco mosaic virus by cryo-electron microscopy.

Authors:  T W Jeng; R A Crowther; G Stubbs; W Chiu
Journal:  J Mol Biol       Date:  1989-01-05       Impact factor: 5.469

10.  Formation of 2-D paracrystals of F-actin on phospholipid layers mixed with quaternary ammonium surfactants.

Authors:  K A Taylor; D W Taylor
Journal:  J Struct Biol       Date:  1992 Mar-Apr       Impact factor: 2.867

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  23 in total

1.  Ultrastructure of desmosome-like contacts of mixed synapses of Mauthner neurons in long-term potentiation.

Authors:  D A Dzeban; N F Mukhtasimova; L L Pavlik; D A Moshkov
Journal:  Neurosci Behav Physiol       Date:  2004-07

2.  Structure and function of a membrane-bound murine MHC class I molecule.

Authors:  H Celia; E Wilson-Kubalek; R A Milligan; L Teyton
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-11       Impact factor: 11.205

3.  A metal-chelating microscopy tip as a new toolbox for single-molecule experiments by atomic force microscopy.

Authors:  L Schmitt; M Ludwig; H E Gaub; R Tampé
Journal:  Biophys J       Date:  2000-06       Impact factor: 4.033

4.  A new twist on protein crystallization.

Authors:  S A Darst
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-07       Impact factor: 11.205

5.  Assembly of retrovirus capsid-nucleocapsid proteins in the presence of membranes or RNA.

Authors:  G Zuber; J McDermott; S Karanjia; W Zhao; M F Schmid; E Barklis
Journal:  J Virol       Date:  2000-08       Impact factor: 5.103

6.  Modulation of nanotube formation by structural modifications of sphingolipids.

Authors:  V S Kulkarni; J M Boggs; R E Brown
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

Review 7.  Challenges and opportunities for new protein crystallization strategies in structure-based drug design.

Authors:  Jessica Lynn Grey; David H Thompson
Journal:  Expert Opin Drug Discov       Date:  2010-11       Impact factor: 6.098

8.  Binding of chimeric metal-binding green fluorescent protein to lipid monolayer.

Authors:  Chartchalerm Isarankura Na Ayudhya; Virapong Prachayasittikul; Hans-Joachim Galla
Journal:  Eur Biophys J       Date:  2004-03-02       Impact factor: 1.733

9.  Reciprocal space representations of helical objects and their projection images for helices constructed from motifs without spherical symmetry.

Authors:  Seunghee Lee; Peter C Doerschuk; John E Johnson
Journal:  Ultramicroscopy       Date:  2008-11-08       Impact factor: 2.689

10.  Insights into the mechanisms of membrane curvature and vesicle scission by the small GTPase Sar1 in the early secretory pathway.

Authors:  Hanaa Hariri; Nilakshee Bhattacharya; Kerri Johnson; Alex J Noble; Scott M Stagg
Journal:  J Mol Biol       Date:  2014-09-02       Impact factor: 5.469

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