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Literature DB >> 9649617

BfiI, a restriction endonuclease from Bacillus firmus S8120, which recognizes the novel non-palindromic sequence 5'-ACTGGG(N)5/4-3'.

J Vitkute¹, Z Maneliene, M Petrusyte, A Janulaitis.

Abstract

A new type IIS restriction endonuclease Bfi I hasbeen partially purified from Bacillus firmus S8120. Bfi I recognizes the non-palindromic hexanucleotide sequence 5'-ACTGGG(N)5/4-3' and makes a staggered cut at the fifth base pair downstream of the recognition sequence on the upper strand, producing a single base 3' protruding end.

Entities: Chemical Species

Mesh：

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Year: 1998 PMID： 9649617 PMCID： PMC147700 DOI： 10.1093/nar/26.14.3348

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

7 in total

Review 1. Class-IIS restriction enzymes--a review.

Authors: W Szybalski; S C Kim; N Hasan; A J Podhajska
Journal: Gene Date: 1991-04 Impact factor: 3.688

2. REBASE - restriction enzymes and methylases.

Authors: R J Roberts; D Macelis
Journal: Nucleic Acids Res Date: 1998-01-01 Impact factor: 16.971

3. GCN4 eukaryotic transcription factor/FokI endonuclease-mediated 'Achilles' heel cleavage': quantitative study of protein-DNA interaction.

Authors: P M Skowron; R Harasimowicz; S M Rutkowska
Journal: Gene Date: 1996-04-17 Impact factor: 3.688

4. Introduction of arbitrary sequences into genes by use of class IIs restriction enzymes.

Authors: R Beck; H Burtscher
Journal: Nucleic Acids Res Date: 1994-03-11 Impact factor: 16.971

5. Some class-IIS restriction endonucleases can cleave across a three-way DNA junction.

Authors: D M Wong; J G Wetmur
Journal: Gene Date: 1994-12-02 Impact factor: 3.688

6. Type IIS restriction enzyme footprinting I. Measurement of a triple helix dissociation constant with Eco57I at 25 degrees C.

Authors: B Ward
Journal: Nucleic Acids Res Date: 1996-06-15 Impact factor: 16.971

7. DNA sequencing with chain-terminating inhibitors.

Authors: F Sanger; S Nicklen; A R Coulson
Journal: Proc Natl Acad Sci U S A Date: 1977-12 Impact factor: 11.205

7 in total

1. How the BfiI restriction enzyme uses one active site to cut two DNA strands.

Authors: Giedrius Sasnauskas; Stephen E Halford; Virginijus Siksnys
Journal: Proc Natl Acad Sci U S A Date: 2003-05-15 Impact factor: 11.205

2. Structure of the metal-independent restriction enzyme BfiI reveals fusion of a specific DNA-binding domain with a nonspecific nuclease.

Authors: Saulius Grazulis; Elena Manakova; Manfred Roessle; Matthias Bochtler; Giedre Tamulaitiene; Robert Huber; Virginijus Siksnys
Journal: Proc Natl Acad Sci U S A Date: 2005-10-24 Impact factor: 11.205

BfiI, a restriction endonuclease from Bacillus firmus S8120, which recognizes the novel non-palindromic sequence 5'-ACTGGG(N)5/4-3'.

Review 1. Class-IIS restriction enzymes--a review.

2. REBASE - restriction enzymes and methylases.

3. GCN4 eukaryotic transcription factor/FokI endonuclease-mediated 'Achilles' heel cleavage': quantitative study of protein-DNA interaction.

4. Introduction of arbitrary sequences into genes by use of class IIs restriction enzymes.

5. Some class-IIS restriction endonucleases can cleave across a three-way DNA junction.

6. Type IIS restriction enzyme footprinting I. Measurement of a triple helix dissociation constant with Eco57I at 25 degrees C.

7. DNA sequencing with chain-terminating inhibitors.

1. How the BfiI restriction enzyme uses one active site to cut two DNA strands.

2. Structure of the metal-independent restriction enzyme BfiI reveals fusion of a specific DNA-binding domain with a nonspecific nuclease.

3. Expression and purification of BmrI restriction endonuclease and its N-terminal cleavage domain variants.

Review 4. Type II restriction endonucleases--a historical perspective and more.

5. Site-specific DNA transesterification catalyzed by a restriction enzyme.

6. DNA cleavage by CgII and NgoAVII requires interaction between N- and R-proteins and extensive nucleotide hydrolysis.

7. Template-directed addition of nucleosides to DNA by the BfiI restriction enzyme.