Literature DB >> 9649543

Characterization of Soymar1, a mariner element in soybean.

T Jarvik1, K G Lark.   

Abstract

Mariner elements, a family of DNA-mediated transposable elements with short, inverted terminal repeats, have been reported in a wide variety of arthropods, as well as planarians, nematodes, and humans. No such element has been reported in a plant. Here we report a mariner element in the plant soybean (Glycine max (L.) Merr.). Although this sequence belongs to the mariner family, it is clearly distinct from previously reported mariner-like elements, as well as from the Tc1 transposon family. Novel aspects of its sequence could be useful as a starting point to identify mariner-like elements in new organisms, and it may prove useful in creating a transformation vector for plants.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9649543      PMCID: PMC1460244     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  13 in total

1.  Use of Ac as an insertional mutagen in Arabidopsis.

Authors:  A M Bhatt; T Page; E J Lawson; C Lister; C Dean
Journal:  Plant J       Date:  1996-06       Impact factor: 6.417

2.  Evolution and extinction of transposable elements in Mendelian populations.

Authors:  N Kaplan; T Darden; C H Langley
Journal:  Genetics       Date:  1985-02       Impact factor: 4.562

3.  Trans-kingdom transposition of the Drosophila element mariner within the protozoan Leishmania.

Authors:  F J Gueiros-Filho; S M Beverley
Journal:  Science       Date:  1997-06-13       Impact factor: 47.728

Review 4.  Horizontal transmission versus ancient origin: mariner in the witness box.

Authors:  P Capy; T Langin; Y Bigot; F Brunet; M J Daboussi; G Periquet; J R David; D L Hartl
Journal:  Genetica       Date:  1994       Impact factor: 1.082

Review 5.  Movers and shakers: maize transposons as tools for analyzing other plant genomes.

Authors:  B I Osborne; B Baker
Journal:  Curr Opin Cell Biol       Date:  1995-06       Impact factor: 8.382

6.  PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates.

Authors:  W M Barnes
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-15       Impact factor: 11.205

7.  Molecular structure of a somatically unstable transposable element in Drosophila.

Authors:  J W Jacobson; M M Medhora; D L Hartl
Journal:  Proc Natl Acad Sci U S A       Date:  1986-11       Impact factor: 11.205

8.  Site-selected insertional mutagenesis of tomato with maize Ac and Ds elements.

Authors:  M B Cooley; A P Goldsbrough; D W Still; J I Yoder
Journal:  Mol Gen Genet       Date:  1996-08-27

9.  Horizontal transmission, vertical inactivation, and stochastic loss of mariner-like transposable elements.

Authors:  A R Lohe; E N Moriyama; D A Lidholm; D L Hartl
Journal:  Mol Biol Evol       Date:  1995-01       Impact factor: 16.240

10.  Tc1 transposase of Caenorhabditis elegans is an endonuclease with a bipartite DNA binding domain.

Authors:  J C Vos; R H Plasterk
Journal:  EMBO J       Date:  1994-12-15       Impact factor: 11.598

View more
  24 in total

1.  Discovery of the transposable element mariner.

Authors:  D Hartl
Journal:  Genetics       Date:  2001-02       Impact factor: 4.562

2.  Self-inflicted wounds, template-directed gap repair and a recombination hotspot. Effects of the mariner transposase.

Authors:  A R Lohe; C Timmons; I Beerman; E R Lozovskaya; D L Hartl
Journal:  Genetics       Date:  2000-02       Impact factor: 4.562

3.  Expanding the diversity of the IS630-Tc1-mariner superfamily: discovery of a unique DD37E transposon and reclassification of the DD37D and DD39D transposons.

Authors:  H Shao; Z Tu
Journal:  Genetics       Date:  2001-11       Impact factor: 4.562

4.  Mariner-like transposases are widespread and diverse in flowering plants.

Authors:  Cédric Feschotte; Susan R Wessler
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-26       Impact factor: 11.205

5.  Neutral evolution of ten types of mariner transposons in the genomes of Caenorhabditis elegans and Caenorhabditis briggsae.

Authors:  David J Witherspoon; Hugh M Robertson
Journal:  J Mol Evol       Date:  2003-06       Impact factor: 2.395

6.  Isolation and characterization of seventy-nine full-length mariner-like transposase genes in the Bambusoideae subfamily.

Authors:  Ming-Bing Zhou; Hao Zhong; Ding-Qin Tang
Journal:  J Plant Res       Date:  2010-12-17       Impact factor: 2.629

7.  Mobilization and evolutionary history of miniature inverted-repeat transposable elements (MITEs) in Beta vulgaris L.

Authors:  Gerhard Menzel; Daryna Dechyeva; Heiko Keller; Cornelia Lange; Heinz Himmelbauer; Thomas Schmidt
Journal:  Chromosome Res       Date:  2007-01-19       Impact factor: 5.239

8.  An Analysis of IS630/Tc1/mariner Transposons in the Genome of a Pacific Oyster, Crassostrea gigas.

Authors:  M V Puzakov; L V Puzakova; S V Cheresiz
Journal:  J Mol Evol       Date:  2018-10-03       Impact factor: 2.395

9.  DNA transposons: nature and applications in genomics.

Authors:  Martín Muñoz-López; José L García-Pérez
Journal:  Curr Genomics       Date:  2010-04       Impact factor: 2.236

10.  SoyTEdb: a comprehensive database of transposable elements in the soybean genome.

Authors:  Jianchang Du; David Grant; Zhixi Tian; Rex T Nelson; Liucun Zhu; Randy C Shoemaker; Jianxin Ma
Journal:  BMC Genomics       Date:  2010-02-17       Impact factor: 3.969

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.