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Literature DB >> 9647861

Microbial community changes in a perturbed agricultural soil investigated by molecular and physiological approaches.

L Ovreås¹, S Jensen, F L Daae, V Torsvik.

Abstract

Changes in soil microbial activity and diversity after incubation either with nitrogen or with a mixture of methane and air were examined. The perturbation by methane and air were characterized in detail and led to reduced diversity and enrichment of methanotrophs which were identified by denaturing gradient gel electrophoresis and 16S rRNA sequencing.

Entities: Chemical

Mesh：

Substances：

Year: 1998 PMID： 9647861 PMCID： PMC106457

Source DB: PubMed Journal: Appl Environ Microbiol ISSN： 0099-2240 Impact factor: 4.792

14 in total

1. Basic local alignment search tool.

Authors: S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal: J Mol Biol Date: 1990-10-05 Impact factor: 5.469

2. Evaluation of methyl fluoride and dimethyl ether as inhibitors of aerobic methane oxidation.

Authors: R S Oremland; C W Culbertson
Journal: Appl Environ Microbiol Date: 1992-09 Impact factor: 4.792

3. Methanol promotes atmospheric methane oxidation by methanotrophic cultures and soils.

Authors: J Benstead; G M King; H G Williams
Journal: Appl Environ Microbiol Date: 1998-03 Impact factor: 4.792

Review 4. Methanotrophic bacteria.

Authors: R S Hanson; T E Hanson
Journal: Microbiol Rev Date: 1996-06

5. Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA.

Authors: L Ovreås; L Forney; F L Daae; V Torsvik
Journal: Appl Environ Microbiol Date: 1997-09 Impact factor: 4.792

6. High diversity in DNA of soil bacteria.

Authors: V Torsvik; J Goksøyr; F L Daae
Journal: Appl Environ Microbiol Date: 1990-03 Impact factor: 4.792

7. Correlation of melting temperature and cesium chloride buoyant density of bacterial deoxyribonucleic acid.

Authors: M Mandel; L Igambi; J Bergendahl; M L Dodson; E Scheltgen
Journal: J Bacteriol Date: 1970-02 Impact factor: 3.490

8. Oxygenation of methane by methane-grown Pseudomonas methanica and Methanomonas methanooxidans.

Authors: I J Higgins; J R Quayle
Journal: Biochem J Date: 1970-06 Impact factor: 3.857

9. Oxidation and assimilation of atmospheric methane by soil methane oxidizers.

Authors: P Roslev; N Iversen; K Henriksen
Journal: Appl Environ Microbiol Date: 1997-03 Impact factor: 4.792

Review 10. Physiology, biochemistry, and specific inhibitors of CH4, NH4+, and CO oxidation by methanotrophs and nitrifiers.

Authors: C Bédard; R Knowles
Journal: Microbiol Rev Date: 1989-03

13 in total

1. Molecular analyses of novel methanotrophic communities in forest soil that oxidize atmospheric methane.

Authors: T Henckel; U Jäckel; S Schnell; R Conrad
Journal: Appl Environ Microbiol Date: 2000-05 Impact factor: 4.792

2. Molecular analyses of the methane-oxidizing microbial community in rice field soil by targeting the genes of the 16S rRNA, particulate methane monooxygenase, and methanol dehydrogenase

Authors:
Journal: Appl Environ Microbiol Date: 1999-05 Impact factor: 4.792

10. Census of the bacterial community of the gypsy moth larval midgut by using culturing and culture-independent methods.

Authors: Nichole A Broderick; Kenneth F Raffa; Robert M Goodman; Jo Handelsman
Journal: Appl Environ Microbiol Date: 2004-01 Impact factor: 4.792

Microbial community changes in a perturbed agricultural soil investigated by molecular and physiological approaches.

1. Basic local alignment search tool.

2. Evaluation of methyl fluoride and dimethyl ether as inhibitors of aerobic methane oxidation.

3. Methanol promotes atmospheric methane oxidation by methanotrophic cultures and soils.

Review 4. Methanotrophic bacteria.

5. Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA.

6. High diversity in DNA of soil bacteria.

7. Correlation of melting temperature and cesium chloride buoyant density of bacterial deoxyribonucleic acid.

8. Oxygenation of methane by methane-grown Pseudomonas methanica and Methanomonas methanooxidans.

9. Oxidation and assimilation of atmospheric methane by soil methane oxidizers.

Review 10. Physiology, biochemistry, and specific inhibitors of CH4, NH4+, and CO oxidation by methanotrophs and nitrifiers.

1. Molecular analyses of novel methanotrophic communities in forest soil that oxidize atmospheric methane.

2. Molecular analyses of the methane-oxidizing microbial community in rice field soil by targeting the genes of the 16S rRNA, particulate methane monooxygenase, and methanol dehydrogenase

3. Microbial community structure at different depths in disturbed and undisturbed semiarid Mediterranean forest soils.

4. Mycobacterium diversity and pyrene mineralization in petroleum-contaminated soils.

5. Cultured bacterial diversity and human impact on alpine glacier cryoconite.

6. Microbial population dynamics associated with crude-oil biodegradation in diverse soils.

7. Evolution of Bacterial Diversity during Enrichment of PCP-Degrading Activated Soils.

8. Characterization of humus microbial communities in adjacent forest types that differ in nitrogen availability.

9. Diversity and abundance of ammonia-oxidizing archaea in hydrothermal vent chimneys of the juan de fuca ridge.

10. Census of the bacterial community of the gypsy moth larval midgut by using culturing and culture-independent methods.