Literature DB >> 21717318

Cultured bacterial diversity and human impact on alpine glacier cryoconite.

Yung Mi Lee1, So-Yeon Kim, Jia Jung, Eun Hye Kim, Kyeung Hee Cho, Franz Schinner, Rosa Margesin, Soon Gyu Hong, Hong Kum Lee.   

Abstract

The anthropogenic effect on the microbial communities in alpine glacier cryoconites was investigated by cultivation and physiological characterization of bacteria from six cryoconite samples taken at sites with different amounts of human impact. Two hundred and forty seven bacterial isolates were included in Actinobacteria (9%, particularly Arthrobacter), Bacteroidetes (14%, particularly Olleya), Firmicutes (0.8%), Alphaproteobacteria (2%), Betaproteobacteria (16%, particularly Janthinobacterium), and Gammaproteobacteria (59%, particularly Pseudomonas). Among them, isolates of Arthrobacter were detected only in samples from sites with no human impact, while isolates affiliated with Enterobacteriaceae were detected only in samples from sites with strong human impact. Bacterial isolates included in Actinobacteria and Bacteroidetes were frequently isolated from pristine sites and showed low maximum growth temperature and enzyme secretion. Bacterial isolates included in Gammaproteobacteria were more frequently isolated from sites with stronger human impact and showed high maximum growth temperature and enzyme secretion. Ecotypic differences were not evident among isolates of Janthinobacterium lividum, Pseudomonas fluorescens, and Pseudomonas veronii, which were frequently isolated from sites with different degrees of anthropogenic effect.

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Year:  2011        PMID: 21717318     DOI: 10.1007/s12275-011-0232-0

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  25 in total

1.  Cultivation-dependent and -independent approaches for determining bacterial diversity in heavy-metal-contaminated soil.

Authors:  Richard J Ellis; Philip Morgan; Andrew J Weightman; John C Fry
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

2.  Influence of an oyster reef on development of the microbial heterotrophic community of an estuarine biofilm.

Authors:  Andreas Nocker; Joe E Lepo; Richard A Snyder
Journal:  Appl Environ Microbiol       Date:  2004-11       Impact factor: 4.792

3.  Site-specific variation in Antarctic marine biofilms established on artificial surfaces.

Authors:  Nicole S Webster; Andrew P Negri
Journal:  Environ Microbiol       Date:  2006-07       Impact factor: 5.491

4.  Phylogenetic diversity of culturable bacteria from alpine permafrost in the Tianshan Mountains, northwestern China.

Authors:  Yu Bai; Daqun Yang; Jianhui Wang; Shijian Xu; Xiaoxiang Wang; Lizhe An
Journal:  Res Microbiol       Date:  2006-04-05       Impact factor: 3.992

5.  Comparative phylogenetic analysis of microbial communities in pristine and hydrocarbon-contaminated Alpine soils.

Authors:  Diane Labbé; Rosa Margesin; Franz Schinner; Lyle G Whyte; Charles W Greer
Journal:  FEMS Microbiol Ecol       Date:  2007-02       Impact factor: 4.194

6.  Microbial community variation in pristine and polluted nearshore Antarctic sediments.

Authors:  Shane M Powell; John P Bowman; Ian Snape; Jonathan S Stark
Journal:  FEMS Microbiol Ecol       Date:  2003-07-01       Impact factor: 4.194

7.  Microbial community changes in a perturbed agricultural soil investigated by molecular and physiological approaches.

Authors:  L Ovreås; S Jensen; F L Daae; V Torsvik
Journal:  Appl Environ Microbiol       Date:  1998-07       Impact factor: 4.792

8.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

Review 9.  Structure and function of anthropogenically altered microbial communities in coastal waters.

Authors:  H W Paerl
Journal:  Curr Opin Microbiol       Date:  1998-06       Impact factor: 7.934

10.  Characterization of hydrocarbon-degrading microbial populations in contaminated and pristine Alpine soils.

Authors:  R Margesin; D Labbé; F Schinner; C W Greer; L G Whyte
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

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  3 in total

1.  Diversity, cold active enzymes and adaptation strategies of bacteria inhabiting glacier cryoconite holes of High Arctic.

Authors:  Purnima Singh; Shiv M Singh; Prashant Dhakephalkar
Journal:  Extremophiles       Date:  2013-12-18       Impact factor: 2.395

2.  Multilocus sequence based identification and adaptational strategies of Pseudomonas sp. from the supraglacial site of Sikkim Himalaya.

Authors:  Srijana Mukhia; Anil Kumar; Poonam Kumari; Rakshak Kumar; Sanjay Kumar
Journal:  PLoS One       Date:  2022-01-24       Impact factor: 3.240

3.  The Janthinobacterium sp. HH01 genome encodes a homologue of the V. cholerae CqsA and L. pneumophila LqsA autoinducer synthases.

Authors:  Claudia Hornung; Anja Poehlein; Frederike S Haack; Martina Schmidt; Katja Dierking; Andrea Pohlen; Hinrich Schulenburg; Melanie Blokesch; Laure Plener; Kirsten Jung; Andreas Bonge; Ines Krohn-Molt; Christian Utpatel; Gabriele Timmermann; Eva Spieck; Andreas Pommerening-Röser; Edna Bode; Helge B Bode; Rolf Daniel; Christel Schmeisser; Wolfgang R Streit
Journal:  PLoS One       Date:  2013-02-06       Impact factor: 3.240

  3 in total

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