Literature DB >> 963232

The structure of two alanine containing ferrichromes: sequence determination by proton magnetic resonance.

M Llinás, J B Neilands.   

Abstract

Metal coordination confers an extraordinary structural stability to the ferrichromes which, independent of their variable amino acid composition, results in a basically unperturbed conformation for all the homologous peptides in the series. The proton magnetic resonance (pmr) characteristics for Al3+ analogues (alumichromes) reflect this conformational isomorphism in usual solvents so that single site substitutions are clearly recognized in the pmr spectra. Thus, the substitution of glycine by L-alanine or L-serine introduce new resonances characteristic of the sidechains and alter the pattern of the amide NH pmr region in that doublets substitute for glycyl triplets at the same site. Since for glycine- and L-serine containing alumichromes the resonances have already been identified, it is possible to unequivocally establish the primary structure of the two L-alanyl homologues ferrichrome C (see article) and sake colorant A (see article) on the basis of the comparative pmr spectra of their Al3+ analogues, namely, alumichrome C and alumisake. The resonance assignment, and hence the site occupancy, is substantiated by the temperature coefficients of the NH chemical shifts, rates of 1H-2H exchange and homonuclear proton spin decoupling experiments centered on the NH spectral region. Occupancy of site 1 by a glycine residue is observed for all known ferrichromes, which serves to conserve a "hairpin" turn. This method of obtaining sequence information should prove of general use for other systems of homologous polypeptides, provided their conformations are not affected by the residue substitutions.

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Year:  1976        PMID: 963232     DOI: 10.1007/BF00863704

Source DB:  PubMed          Journal:  Biophys Struct Mech        ISSN: 0340-1057


  20 in total

1.  The influence of amino acid substitutions on the conformational energy of cytochrome c.

Authors:  P K Warme
Journal:  Biochemistry       Date:  1975-08-12       Impact factor: 3.162

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3.  Nuclear magnetic resonance titration curves of histidine ring protons. V. Comparative study of cytochrome c from three species and the assignment of individual proton resonances.

Authors:  J S Cohen; M B Hayes
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4.  The reverse turn as a polypeptide conformation in globular proteins.

Authors:  J L Crawford; W N Lipscomb; C G Schellman
Journal:  Proc Natl Acad Sci U S A       Date:  1973-02       Impact factor: 11.205

5.  The biological activity of some siderochrome derivatives.

Authors:  T Emery; L Emery
Journal:  Biochem Biophys Res Commun       Date:  1973-02-05       Impact factor: 3.575

6.  The solution conformation of the ferrichromes. V. The hydrogen exchange kinetics of ferrichrome analogues; the conformational state of the peptides.

Authors:  M Llinás; M P Klein; J B Neilands
Journal:  J Biol Chem       Date:  1973-02-10       Impact factor: 5.157

7.  Solution conformation of ferrichrome, a microbial iron transport cyclohexapeptide, as deduced by high resolution proton magnetic resonance.

Authors:  M Llinás; M P Klein; J B Neilands
Journal:  J Mol Biol       Date:  1970-09-28       Impact factor: 5.469

8.  Temperature dependence of amide proton chemical shifts: the secondary structures of gramicidin S and valinomycin.

Authors:  M Ohnishi; D W Urry
Journal:  Biochem Biophys Res Commun       Date:  1969-07-23       Impact factor: 3.575

9.  Ferrichrome-A tetrahydrate. Determination of crystal and molecular structure.

Authors:  A Zalkin; J D Forrester; D H Templeton
Journal:  J Am Chem Soc       Date:  1966-04-20       Impact factor: 15.419

10.  The use of 13C nuclear magnetic resonance of aromatic amino acid residues to determine the midpoint oxidation-reduction potential of each iron-sulfur cluster of Clostridium acidi-urici and Clostridium pasteurianum ferredoxins.

Authors:  E L Packer; H Sternlicht
Journal:  J Biol Chem       Date:  1975-03-25       Impact factor: 5.157

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  3 in total

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Authors:  C A Prody; J B Neilands
Journal:  J Bacteriol       Date:  1984-03       Impact factor: 3.490

2.  Extracellular siderophores from Aspergillus ochraceous.

Authors:  M A Jalal; R Mocharla; C L Barnes; M B Hossain; D R Powell; D L Eng-Wilmot; S L Grayson; B A Benson; D van der Helm
Journal:  J Bacteriol       Date:  1984-05       Impact factor: 3.490

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  3 in total

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