Literature DB >> 9628878

In vitro chromatin remodelling by chromatin accessibility complex (CHRAC) at the SV40 origin of DNA replication.

V Alexiadis1, P D Varga-Weisz, E Bonte, P B Becker, C Gruss.   

Abstract

DNA replication is initiated by binding of initiation factors to the origin of replication. Nucleosomes are known to inhibit the access of the replication machinery to origin sequences. Recently, nucleosome remodelling factors have been identified that increase the accessibility of nucleosomal DNA to transcription regulators. To test whether the initiation of DNA replication from an origin covered by nucleosomes would also benefit from the action of nucleosome remodelling factors, we reconstituted SV40 DNA into chromatin in Drosophila embryo extracts. In the presence of T-antigen and ATP, a chromatin-associated cofactor allowed efficient replication from a nucleosomal origin in vitro. In search of the energy-dependent cofactor responsible we found that purified 'chromatin accessibility complex' (CHRAC) was able to alter the nucleosomal structure at the origin allowing the binding of T-antigen and efficient initiation of replication. These experiments provide evidence for the involvement of a nucleosome remodelling machine in structural changes at the SV40 origin of DNA replication in vitro.

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Year:  1998        PMID: 9628878      PMCID: PMC1170679          DOI: 10.1093/emboj/17.12.3428

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  67 in total

1.  Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II.

Authors:  P D Varga-Weisz; M Wilm; E Bonte; K Dumas; M Mann; P B Becker
Journal:  Nature       Date:  1997-08-07       Impact factor: 49.962

2.  ACF, an ISWI-containing and ATP-utilizing chromatin assembly and remodeling factor.

Authors:  T Ito; M Bulger; M J Pazin; R Kobayashi; J T Kadonaga
Journal:  Cell       Date:  1997-07-11       Impact factor: 41.582

Review 3.  Chromatin proteins involved in the initiation of DNA replication.

Authors:  A Rowles; J J Blow
Journal:  Curr Opin Genet Dev       Date:  1997-04       Impact factor: 5.578

4.  Studies on deoxyribonucleoprotein structure. Redistribution of proteins in mixtures of deoxyribonucleoproteins, DNA and RNA.

Authors:  Y V Ilyin; A Y Varshavsky; U N Mickelsaar; G P Georgiev
Journal:  Eur J Biochem       Date:  1971-09-24

5.  Replication timing of genes and middle repetitive sequences.

Authors:  M A Goldman; G P Holmquist; M C Gray; L A Caston; A Nag
Journal:  Science       Date:  1984-05-18       Impact factor: 47.728

Review 6.  The establishment of active promoters in chromatin.

Authors:  P B Becker
Journal:  Bioessays       Date:  1994-08       Impact factor: 4.345

7.  A nucleosome-free region in SV40 minichromosomes.

Authors:  E B Jakobovits; S Bratosin; Y Aloni
Journal:  Nature       Date:  1980-05-22       Impact factor: 49.962

8.  Absence of nucleosomes in a fraction of SV40 chromatin between the origin of replication and the region coding for the late leader RNA.

Authors:  S Saragosti; G Moyne; M Yaniv
Journal:  Cell       Date:  1980-05       Impact factor: 41.582

9.  Accessibility to topoisomerases I and II regulates the replication efficiency of simian virus 40 minichromosomes.

Authors:  L Halmer; C Gruss
Journal:  Mol Cell Biol       Date:  1997-05       Impact factor: 4.272

10.  ATP-dependent nucleosome reconfiguration and transcriptional activation from preassembled chromatin templates.

Authors:  M J Pazin; R T Kamakaka; J T Kadonaga
Journal:  Science       Date:  1994-12-23       Impact factor: 47.728

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  28 in total

1.  DNA replication in quiescent cell nuclei: regulation by the nuclear envelope and chromatin structure.

Authors:  Z H Lu; H Xu; G H Leno
Journal:  Mol Biol Cell       Date:  1999-12       Impact factor: 4.138

2.  SWI-SNF-mediated nucleosome remodeling: role of histone octamer mobility in the persistence of the remodeled state.

Authors:  M Jaskelioff; I M Gavin; C L Peterson; C Logie
Journal:  Mol Cell Biol       Date:  2000-05       Impact factor: 4.272

3.  The protein encoded by the proto-oncogene DEK changes the topology of chromatin and reduces the efficiency of DNA replication in a chromatin-specific manner.

Authors:  V Alexiadis; T Waldmann; J Andersen; M Mann; R Knippers; C Gruss
Journal:  Genes Dev       Date:  2000-06-01       Impact factor: 11.361

4.  Chromatin remodeling and activation of chromosomal DNA replication by an acidic transcriptional activation domain from BRCA1.

Authors:  Y F Hu; Z L Hao; R Li
Journal:  Genes Dev       Date:  1999-03-15       Impact factor: 11.361

5.  Acf1, the largest subunit of CHRAC, regulates ISWI-induced nucleosome remodelling.

Authors:  A Eberharter; S Ferrari; G Längst; T Straub; A Imhof; P Varga-Weisz; M Wilm; P B Becker
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

6.  Epstein-Barr nuclear antigen 1 binds and destabilizes nucleosomes at the viral origin of latent DNA replication.

Authors:  T M Avolio-Hunter; P N Lewis; L Frappier
Journal:  Nucleic Acids Res       Date:  2001-09-01       Impact factor: 16.971

7.  A chromosomal position effect on gene targeting in human cells.

Authors:  Rafael J Yáñez; Andrew C G Porter
Journal:  Nucleic Acids Res       Date:  2002-11-15       Impact factor: 16.971

8.  Identification and cloning of two putative subunits of DNA polymerase epsilon in fission yeast.

Authors:  Maria-Grazia Spiga; Gennaro D'Urso
Journal:  Nucleic Acids Res       Date:  2004-09-23       Impact factor: 16.971

9.  Chromatin remodeler sucrose nonfermenting 2 homolog (SNF2H) is recruited onto DNA replication origins through interaction with Cdc10 protein-dependent transcript 1 (Cdt1) and promotes pre-replication complex formation.

Authors:  Nozomi Sugimoto; Takashi Yugawa; Masayoshi Iizuka; Tohru Kiyono; Masatoshi Fujita
Journal:  J Biol Chem       Date:  2011-09-20       Impact factor: 5.157

10.  A coordinated temporal interplay of nucleosome reorganization factor, sister chromatin cohesion factor, and DNA polymerase alpha facilitates DNA replication.

Authors:  Yanjiao Zhou; Teresa S-F Wang
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

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