Literature DB >> 9615222

The human HNRPD locus maps to 4q21 and encodes a highly conserved protein.

L A Dempsey1, M J Li, A DePace, P Bray-Ward, N Maizels.   

Abstract

The hnRNP D protein interacts with nucleic acids both in vivo and in vitro. Like many other proteins that interact with RNA, it contains RBD (or "RRM") domains and arg-gly-gly (RGG) motifs. We have examined the organization and localization of the human and murine genes that encode the hnRNP D protein. Comparison of the predicted sequences of the hnRNP D proteins in human and mouse shows that they are 96.9% identical (98.9% similar). This very high level of conservation suggests a critical function for hnRNP D. Sequence analysis of the human HNRPD gene shows that the protein is encoded by eight exons and that two additional exons specify sequences in the 3' UTR. Use of two of the coding exons is determined by alternative splicing of the HNRPD mRNA. The human HNRPD gene maps to 4q21. The mouse Hnrpd gene maps to the F region of chromosome 3, which is syntenic with the human 4q21 region.

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Year:  1998        PMID: 9615222     DOI: 10.1006/geno.1998.5237

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  20 in total

1.  HuR binding to cytoplasmic mRNA is perturbed by heat shock.

Authors:  I E Gallouzi; C M Brennan; M G Stenberg; M S Swanson; A Eversole; N Maizels; J A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

2.  Versatile role for hnRNP D isoforms in the differential regulation of cytoplasmic mRNA turnover.

Authors:  N Xu; C Y Chen; A B Shyu
Journal:  Mol Cell Biol       Date:  2001-10       Impact factor: 4.272

3.  Regulation of AUF1 expression via conserved alternatively spliced elements in the 3' untranslated region.

Authors:  G M Wilson; Y Sun; J Sellers; H Lu; N Penkar; G Dillard; G Brewer
Journal:  Mol Cell Biol       Date:  1999-06       Impact factor: 4.272

4.  Protein kinase A enhances, whereas glycogen synthase kinase-3 beta inhibits, the activity of the exon 2-encoded transactivator domain of heterogeneous nuclear ribonucleoprotein D in a hierarchical fashion.

Authors:  Mate Tolnay; Yuang-Taung Juang; George C Tsokos
Journal:  Biochem J       Date:  2002-04-01       Impact factor: 3.857

5.  Ubiquitin-dependent mechanism regulates rapid turnover of AU-rich cytokine mRNAs.

Authors:  Gaurav Laroia; Bedabrata Sarkar; Robert J Schneider
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-12       Impact factor: 11.205

6.  In-vitro dual binding activity of a evolutionarily related subgroup of hnRNP proteins.

Authors:  Antonella Bandiera; Nevenka Medic; A Akintunde Akindahunsi; Giorgio Manzini
Journal:  Mol Cell Biochem       Date:  2005-01       Impact factor: 3.396

7.  A+U-rich-element RNA-binding factor 1/heterogeneous nuclear ribonucleoprotein D gene expression is regulated by oestrogen in the rat uterus.

Authors:  Yukitomo Arao; Atsumi Kikuchi; Kazuhiro Ikeda; Satoshi Nomoto; Hyogo Horiguchi; Fujio Kayama
Journal:  Biochem J       Date:  2002-01-01       Impact factor: 3.857

8.  Heterogeneous nuclear ribonucleoprotein D0 contains transactivator and DNA-binding domains.

Authors:  M Tolnay; L Baranyi; G C Tsokos
Journal:  Biochem J       Date:  2000-05-15       Impact factor: 3.857

9.  Heterogeneous nuclear ribonucleoprotein D/AUF1 interacts with heterogeneous nuclear ribonucleoprotein L.

Authors:  Hong-Gyu Park; Ji-Young Yoon; Mieyoung Choi
Journal:  J Biosci       Date:  2007-12       Impact factor: 1.826

10.  Alternate exon insertion controls selective ubiquitination and degradation of different AUF1 protein isoforms.

Authors:  Gaurav Laroia; Robert J Schneider
Journal:  Nucleic Acids Res       Date:  2002-07-15       Impact factor: 16.971

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