Literature DB >> 15724445

In-vitro dual binding activity of a evolutionarily related subgroup of hnRNP proteins.

Antonella Bandiera1, Nevenka Medic, A Akintunde Akindahunsi, Giorgio Manzini.   

Abstract

The wide family of heterogeneous nuclear ribonucleoproteins (hnRNPs) comprises members that interact with single-stranded nucleic acids. On the basis of their structure, some of them are characterised by a tandem RNA-binding domain (RBD) and a glycine-rich C-terminus, showing a high degree of homology. Recently, we have isolated some proteins belonging to this group that interact with single-stranded cytosine-block telomeric DNA. The aim of the present investigation is to better characterise the relationship of some structural features shared by these proteins and their in-vitro interaction with the telomeric type sequences. We analysed the in-vitro binding properties of some of these components toward both single-stranded telomeric motifs. Using deletion mutants, the relationship between cytosine-rich motif binding activity and the structural features of one of these proteins is further characterized. This binding activity appears to be related to a subgroup of the 2xRBD+Glycine rich hnRNP, suggesting functionally distinct properties of these proteins, in agreement with their evolutionary relationship.

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Year:  2005        PMID: 15724445     DOI: 10.1007/s11010-005-3700-1

Source DB:  PubMed          Journal:  Mol Cell Biochem        ISSN: 0300-8177            Impact factor:   3.396


  28 in total

Review 1.  hnRNP complexes: composition, structure, and function.

Authors:  A M Krecic; M S Swanson
Journal:  Curr Opin Cell Biol       Date:  1999-06       Impact factor: 8.382

2.  Purification and characterization of a protein binding to the SP6 kappa promoter. A potential role for CArG-box binding factor-A in kappa transcription.

Authors:  M Bemark; H Olsson; D Heinegård; T Leanderson
Journal:  J Biol Chem       Date:  1998-07-24       Impact factor: 5.157

3.  Distinct functions of the closely related tandem RNA-recognition motifs of hnRNP A1.

Authors:  A Mayeda; S H Munroe; R M Xu; A R Krainer
Journal:  RNA       Date:  1998-09       Impact factor: 4.942

4.  Interaction of hnRNP A2/B1 isoforms with telomeric ssDNA and the in vitro function.

Authors:  H Kamma; M Fujimoto; M Fujiwara; M Matsui; H Horiguchi; M Hamasaki; H Satoh
Journal:  Biochem Biophys Res Commun       Date:  2001-01-26       Impact factor: 3.575

Review 5.  Conserved structures and diversity of functions of RNA-binding proteins.

Authors:  C G Burd; G Dreyfuss
Journal:  Science       Date:  1994-07-29       Impact factor: 47.728

6.  Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA.

Authors:  M Katahira; Y Miyanoiri; Y Enokizono; G Matsuda; T Nagata; F Ishikawa; S Uesugi
Journal:  J Mol Biol       Date:  2001-08-31       Impact factor: 5.469

7.  Two forms of expression and genomic structure of the human heterogeneous nuclear ribonucleoprotein D-like JKTBP gene (HNRPDL).

Authors:  D Kamei; N Tsuchiya; M Yamazaki; H Meguro; M Yamada
Journal:  Gene       Date:  1999-03-04       Impact factor: 3.688

8.  Telomere elongation by hnRNP A1 and a derivative that interacts with telomeric repeats and telomerase.

Authors:  H LaBranche; S Dupuis; Y Ben-David; M R Bani; R J Wellinger; B Chabot
Journal:  Nat Genet       Date:  1998-06       Impact factor: 38.330

9.  The human HNRPD locus maps to 4q21 and encodes a highly conserved protein.

Authors:  L A Dempsey; M J Li; A DePace; P Bray-Ward; N Maizels
Journal:  Genomics       Date:  1998-05-01       Impact factor: 5.736

10.  The UUAG-specific RNA binding protein, heterogeneous nuclear ribonucleoprotein D0. Common modular structure and binding properties of the 2xRBD-Gly family.

Authors:  Y Kajita; J Nakayama; M Aizawa; F Ishikawa
Journal:  J Biol Chem       Date:  1995-09-22       Impact factor: 5.157

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  2 in total

Review 1.  Telomere dynamics: the means to an end.

Authors:  M Matulić; M Sopta; I Rubelj
Journal:  Cell Prolif       Date:  2007-08       Impact factor: 6.831

2.  NRF IRES activity is mediated by RNA binding protein JKTBP1 and a 14-nt RNA element.

Authors:  Marc René Reboll; André Oumard; Aniko Carla Gazdag; Isabelle Renger; Birgit Ritter; Michael Schwarzer; Hansjoerg Hauser; Monika Wood; Michiyuki Yamada; Klaus Resch; Mahtab Nourbakhsh
Journal:  RNA       Date:  2007-06-25       Impact factor: 4.942

  2 in total

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