Literature DB >> 9611211

Transvection in the Drosophila Abd-B domain: extensive upstream sequences are involved in anchoring distant cis-regulatory regions to the promoter.

L Sipos1, J Mihály, F Karch, P Schedl, J Gausz, H Gyurkovics.   

Abstract

The Abd-B gene, one of the three homeotic genes in the Drosophila bithorax complex (BX-C), is required for the proper identity of the fifth through the eighth abdominal segments (corresponding to parasegments 10-14) of the fruitfly. The morphological difference between these four segments is due to the differential expression of Abd-B, which is achieved by the action of the parasegment-specific cis-regulatory regions infra-abdominal-5 (iab-5), -6, -7 and -8. The dominant gain-of-function mutation Frontabdominal-7 (Fab-7) removes a boundary separating two of these cis-regulatory regions, iab-6 and iab-7. As a consequence of the Fab-7 deletion, the parasegment 12- (PS12-) specific iab-7 is ectopically activated in PS11. This results in the transformation of the sixth abdominal segment (A6) into the seventh (A7) in Fab-7 flies. Here we report that point mutations of the Abd-B gene in trans suppress the Fab-7 phenotype in a pairing-dependent manner and thus represent a type of transvection. We show that the observed suppression is the result of trans-regulation of the defective Abd-B gene by the ectopically activated iab-7. Unlike previously demonstrated cases of trans-regulation in the Abd-B locus, trans-suppression of Fab-7 is sensitive to heterozygosity for chromosomal rearrangements that disturb homologous pairing at the nearby Ubx locus. However, in contrast to Ubx, the transvection we observed in the Abd-B locus is insensitive to the allelic status of zeste. Analysis of different deletion alleles of Abd-B that enhance trans-regulation suggests that an extensive upstream region, different from the sequences required for transcription initiation, mediates interactions between the iab cis-regulatory regions and the proximal Abd-B promoter. Moreover, we find that the amount of DNA deleted in the upstream region is roughly proportional to the strength of trans-interaction, suggesting that this region consists of numerous discrete elements that cooperate in tethering the iab regulatory domains to Abd-B. Possible implications of the tethering complex for the regulation of Abd-B are discussed. In addition, we present evidence that the tenacity of trans-interactions in the Abd-B gene may vary, depending upon the tissue and stage of development.

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Year:  1998        PMID: 9611211      PMCID: PMC1460194     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  38 in total

1.  A Polycomb and GAGA dependent silencer adjoins the Fab-7 boundary in the Drosophila bithorax complex.

Authors:  K Hagstrom; M Muller; P Schedl
Journal:  Genetics       Date:  1997-08       Impact factor: 4.562

2.  A fragment of engrailed regulatory DNA can mediate transvection of the white gene in Drosophila.

Authors:  J A Kassis; E P VanSickle; S M Sensabaugh
Journal:  Genetics       Date:  1991-08       Impact factor: 4.562

3.  Genetic organization of Drosophila bithorax complex.

Authors:  E Sánchez-Herrero; I Vernós; R Marco; G Morata
Journal:  Nature       Date:  1985 Jan 10-18       Impact factor: 49.962

4.  Analysis of the functional role of the Polycomb chromo domain in Drosophila melanogaster.

Authors:  S Messmer; A Franke; R Paro
Journal:  Genes Dev       Date:  1992-07       Impact factor: 11.361

5.  Elements of the Drosophila bithorax complex that mediate repression by Polycomb group products.

Authors:  J Simon; A Chiang; W Bender; M J Shimell; M O'Connor
Journal:  Dev Biol       Date:  1993-07       Impact factor: 3.582

6.  Transvection at the eyes absent gene of Drosophila.

Authors:  W M Leiserson; N M Bonini; S Benzer
Journal:  Genetics       Date:  1994-12       Impact factor: 4.562

7.  Mcp and Fab-7: molecular analysis of putative boundaries of cis-regulatory domains in the bithorax complex of Drosophila melanogaster.

Authors:  F Karch; M Galloni; L Sipos; J Gausz; H Gyurkovics; P Schedl
Journal:  Nucleic Acids Res       Date:  1994-08-11       Impact factor: 16.971

8.  abdA expression in Drosophila embryos.

Authors:  F Karch; W Bender; B Weiffenbach
Journal:  Genes Dev       Date:  1990-09       Impact factor: 11.361

9.  The morphogenetic and regulatory functions of the Drosophila Abdominal-B gene are encoded in overlapping RNAs transcribed from separate promoters.

Authors:  M Zavortink; S Sakonju
Journal:  Genes Dev       Date:  1989-12       Impact factor: 11.361

10.  The bluetail transposon: evidence for independent cis-regulatory domains and domain boundaries in the bithorax complex.

Authors:  M Galloni; H Gyurkovics; P Schedl; F Karch
Journal:  EMBO J       Date:  1993-03       Impact factor: 11.598

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  42 in total

1.  Enhancer action in trans is permitted throughout the Drosophila genome.

Authors:  Ji-Long Chen; Kathryn L Huisinga; Michaela M Viering; Sharon A Ou; C-ting Wu; Pamela K Geyer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

2.  Promoter-proximal tethering elements regulate enhancer-promoter specificity in the Drosophila Antennapedia complex.

Authors:  Vincent C Calhoun; Angelike Stathopoulos; Michael Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-01       Impact factor: 11.205

3.  The regulatory regions required for B' paramutation and expression are located far upstream of the maize b1 transcribed sequences.

Authors:  Maike Stam; Christiane Belele; Wusirika Ramakrishna; Jane E Dorweiler; Jeffrey L Bennetzen; Vicki L Chandler
Journal:  Genetics       Date:  2002-10       Impact factor: 4.562

4.  Enhancer choice in cis and in trans in Drosophila melanogaster: role of the promoter.

Authors:  James R Morris; Dmitri A Petrov; Anne M Lee; Chao-Ting Wu
Journal:  Genetics       Date:  2004-08       Impact factor: 4.562

5.  The Promoter Targeting Sequence mediates epigenetically heritable transcription memory.

Authors:  Qing Lin; Qi Chen; Lan Lin; Jumin Zhou
Journal:  Genes Dev       Date:  2004-11-01       Impact factor: 11.361

6.  Efficient and specific targeting of Polycomb group proteins requires cooperative interaction between Grainyhead and Pleiohomeotic.

Authors:  András Blastyák; Rakesh K Mishra; Francois Karch; Henrik Gyurkovics
Journal:  Mol Cell Biol       Date:  2006-02       Impact factor: 4.272

7.  Promoter targeting sequence mediates enhancer interference in the Drosophila embryo.

Authors:  Qing Lin; Qi Chen; Lan Lin; Sheryl Smith; Jumin Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-16       Impact factor: 11.205

8.  Drosophila gypsy insulator and yellow enhancers regulate activity of yellow promoter through the same regulatory element.

Authors:  Larisa Melnikova; Margarita Kostuchenko; Margarita Silicheva; Pavel Georgiev
Journal:  Chromosoma       Date:  2007-11-10       Impact factor: 4.316

9.  Study of the functional interaction between Mcp insulators from the Drosophila bithorax complex: effects of insulator pairing on enhancer-promoter communication.

Authors:  Olga Kyrchanova; Stepan Toshchakov; Alexander Parshikov; Pavel Georgiev
Journal:  Mol Cell Biol       Date:  2007-02-05       Impact factor: 4.272

10.  Effects of chromosomal rearrangements on transvection at the yellow gene of Drosophila melanogaster.

Authors:  Sharon A Ou; Elaine Chang; Szexian Lee; Katherine So; C-ting Wu; James R Morris
Journal:  Genetics       Date:  2009-08-10       Impact factor: 4.562

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