Literature DB >> 9608054

Signature sequences in diverse proteins provide evidence of a close evolutionary relationship between the Deinococcus-thermus group and cyanobacteria.

R S Gupta1, V Johari.   

Abstract

A number of proteins have been identified that contain prominent sequence signatures that are uniquely shared by the members of the Deinococcus-Thermus genera and the cyanobacterial species but which are not found in any of the other eubacterial or archaebacterial homologs. The proteins containing such sequence signatures include (1) the DnaJ/Hsp40 family of proteins, (2) DNA polymerase I, (3) the protein synthesis elongation factor EF-Tu, and (4) the elongation factor EF-Ts. A strong affinity of the Deinococcus-Thermus species to cyanobacteria is also seen in the phylogenetic trees based on Hsp70 and DnaJ sequences. These results provide strong evidence of a close and specific evolutionary relationship between species belonging to these two eubacterial divisions.

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Year:  1998        PMID: 9608054     DOI: 10.1007/pl00006352

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  12 in total

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Review 5.  Protein phylogenies and signature sequences: A reappraisal of evolutionary relationships among archaebacteria, eubacteria, and eukaryotes.

Authors:  R S Gupta
Journal:  Microbiol Mol Biol Rev       Date:  1998-12       Impact factor: 11.056

6.  Phylogenetic analysis of proteins involved in the stringent response in plant cells.

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7.  Distinctive protein signatures provide molecular markers and evidence for the monophyletic nature of the deinococcus-thermus phylum.

Authors:  Emma Griffiths; Radhey S Gupta
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

8.  Effect of 60Co-Gamma Ionizing Radiation and Desiccation Stress on Protein Profile of Anabaena 7120.

Authors:  Harinder Singh; Shree Kumar Apte
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9.  Protein sequence signatures support the African clade of mammals.

Authors:  M A van Dijk ; O Madsen; F Catzeflis; M J Stanhope; W W de Jong ; M Pagel
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

10.  The RelA/SpoT homolog (RSH) superfamily: distribution and functional evolution of ppGpp synthetases and hydrolases across the tree of life.

Authors:  Gemma C Atkinson; Tanel Tenson; Vasili Hauryliuk
Journal:  PLoS One       Date:  2011-08-09       Impact factor: 3.240

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