Literature DB >> 9605319

A thioredoxin fusion protein of VanH, a D-lactate dehydrogenase from Enterococcus faecium: cloning, expression, purification, kinetic analysis, and crystallization.

V S Stoll1, A V Manohar, W Gillon, E L MacFarlane, R C Hynes, E F Pai.   

Abstract

The gene encoding the vancomycin resistance protein VanH from Enterococcus faecium, a D-lactate dehydrogenase, has been cloned into a thioredoxin expression system (pTRxFus) and expressed as a fusion protein. The use of several other expression systems yielded only inclusion bodies from which no functional protein could be recovered. Experiments to remove the thioredoxin moiety by enterokinase cleavage at the engineered recognition site under a variety of conditions resulted in nonspecific proteolysis and inactivation of the protein. The intact fusion protein was, therefore, used for kinetic studies and crystallization trials. It has been purified to greater than 90% homogeneity by ammonium sulfate precipitation followed by phenyl Sepharose chromatography. Based on k(cat)/KM for pyruvate, it is 20% as active as native VanH. Michaelis constants for NADPH, NADH, and pyruvate, of approximately 3.5 microM, 19.0 microM, and 1.5 mM, respectively, were comparable to those reported for the native VanH (Bugg TDH et al., 1991, Biochemistry 30:10408-10415). Like native VanH, maximum activity of the fusion protein requires the presence of an anion (phosphate or acetate), however, in addition, a strongly reducing environment is needed for optimal efficacy. Competitive inhibition constants for ADP-ribose, NAD+, and oxamate have also been determined. Crystallization by hanging drop vapor diffusion produced two different crystal forms, one hexagonal and the other tetragonal. Flash-frozen crystals of the tetragonal form diffracted to 3.0 A resolution at a synchrotron radiation source.

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Year:  1998        PMID: 9605319      PMCID: PMC2144001          DOI: 10.1002/pro.5560070508

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  27 in total

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Authors:  R S Schwalbe; J T Stapleton; P H Gilligan
Journal:  N Engl J Med       Date:  1987-04-09       Impact factor: 91.245

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Authors:  W W Cleland
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

5.  Overexpression, purification, and characterization of VanX, a D-, D-dipeptidase which is essential for vancomycin resistance in Enterococcus faecium BM4147.

Authors:  Z Wu; G D Wright; C T Walsh
Journal:  Biochemistry       Date:  1995-02-28       Impact factor: 3.162

6.  Essential role of arginine 235 in the substrate-binding of Lactobacillus plantarum D-lactate dehydrogenase.

Authors:  H Taguchi; T Ohta
Journal:  J Biochem       Date:  1994-05       Impact factor: 3.387

7.  Identification of the DNA-binding site for the phosphorylated VanR protein required for vancomycin resistance in Enterococcus faecium.

Authors:  T R Holman; Z Wu; B L Wanner; C T Walsh
Journal:  Biochemistry       Date:  1994-04-19       Impact factor: 3.162

8.  Phosphinate analogs of D-, D-dipeptides: slow-binding inhibition and proteolysis protection of VanX, a D-, D-dipeptidase required for vancomycin resistance in Enterococcus faecium.

Authors:  Z Wu; C T Walsh
Journal:  Proc Natl Acad Sci U S A       Date:  1995-12-05       Impact factor: 11.205

9.  Contribution of VanY D,D-carboxypeptidase to glycopeptide resistance in Enterococcus faecalis by hydrolysis of peptidoglycan precursors.

Authors:  M Arthur; F Depardieu; H A Snaith; P E Reynolds; P Courvalin
Journal:  Antimicrob Agents Chemother       Date:  1994-09       Impact factor: 5.191

10.  The vanZ gene of Tn1546 from Enterococcus faecium BM4147 confers resistance to teicoplanin.

Authors:  M Arthur; F Depardieu; C Molinas; P Reynolds; P Courvalin
Journal:  Gene       Date:  1995-02-27       Impact factor: 3.688

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  11 in total

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7.  Polymer-driven crystallization.

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Journal:  Protein Sci       Date:  2007-11       Impact factor: 6.725

Review 8.  Crystal structures of fusion proteins with large-affinity tags.

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Review 9.  Molecular mechanisms of vancomycin resistance.

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10.  Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase.

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