Literature DB >> 9603958

Novel galactose-binding proteins in Annelida. Characterization of 29-kDa tandem repeat-type lectins from the earthworm Lumbricus terrestris.

J Hirabayashi1, S K Dutta, K Kasai.   

Abstract

Novel type lectins were found in the phylum Annelida, i.e. in the earthworm, tubifex, leech, and lugworm. The lectins (29-31 kDa) were extracted from the worms without the use of detergent and purified by affinity chromatography on asialofetuin-agarose. On the basis of the partial primary structures of the earthworm Lumbricus terrestris 29-kDa lectin (EW29), degenerate primers were synthesized for use in the reverse transcriptase-polymerase chain reaction. An amplified 155-base pair fragment was used to screen a cDNA library. Four types of full-length clones were obtained, all of which encoded 260 amino acids, but which were found to differ at 29 nucleotide positions. Since three of them resulted in non-silent substitutions, EW29 mRNA was considered to be a mixture of at least three distinct polynucleotides encoding the following proteins: Ala44-Gln197-Ile213 (clone 5), Gly44-Gln197-Val213 (clone 7), and Ala44-His197-Ile213 (clones 8 and 9; different at the nucleotide level, but encoding an identical polypeptide). Genomic polymerase chain reaction using DNA from a single worm revealed that the single worm already had four sets of cDNAs. The EW29 protein showed two features. First, the lectin was composed of two homologous domains (14,500 Da) showing 27% identity with each other. When each of the domains was separately expressed in Escherichia coli, the C-terminal domain was found to bind to asialofetuin-agarose as strongly as the whole protein, whereas the N-terminal domain did not bind and only retardation was observed. EW29 was found to exist as a monomer under non-denaturing conditions. It had significant hemagglutinating activity, which was inhibited by a wide range of galactose-containing saccharides. Second, EW29 contained multiple short conserved motifs, "Gly-X-X-X-Gln-X-Trp." Similar motifs have been found in many carbohydrate-recognizing proteins from an extensive variety of organisms, e.g. plant lectin ricin B-chain and Clostridium botulinum 33-kDa hemagglutinin. Therefore, these carbohydrate-recognition proteins appear to form a protein superfamily.

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Year:  1998        PMID: 9603958     DOI: 10.1074/jbc.273.23.14450

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  18 in total

1.  (1)H, (13)C, and (15)N chemical shift assignment of the C-terminal 15 kDa domain of a novel galactose-binding protein from the earthworm Lumbricus terrestris.

Authors:  Hikaru Hemmi; Atsushi Kuno; Shigeyasu Ito; Ryuichiro Suzuki; Satoshi Kaneko; Tsunemi Hasegawa; Jun Hirabayashi; Ken-Ichi Kasai
Journal:  J Biomol NMR       Date:  2004-11       Impact factor: 2.835

2.  Purification, Biochemical Characterization, and Amino Acid Sequence of a Novel Type of Lectin from Aplysia dactylomela Eggs with Antibacterial/Antibiofilm Potential.

Authors:  Rômulo Farias Carneiro; Renato Cézar Farias Torres; Renata Pinheiro Chaves; Mayron Alves de Vasconcelos; Bruno Lopes de Sousa; André Castelo Rodrigues Goveia; Francisco Vassiliepe Arruda; Maria Nágila Carneiro Matos; Helena Matthews-Cascon; Valder Nogueira Freire; Edson Holanda Teixeira; Celso Shiniti Nagano; Alexandre Holanda Sampaio
Journal:  Mar Biotechnol (NY)       Date:  2017-02-01       Impact factor: 3.619

Review 3.  Lectin engineering: the possible and the actual.

Authors:  Jun Hirabayashi; Ryoichi Arai
Journal:  Interface Focus       Date:  2019-02-15       Impact factor: 3.906

4.  A novel mechanism of xylan binding by a lectin-like module from Streptomyces lividans xylanase 10A.

Authors:  A B Boraston; P Tomme; E A Amandoron; D G Kilburn
Journal:  Biochem J       Date:  2000-09-15       Impact factor: 3.857

5.  Characterization of an exo-beta-1,3-galactanase from Clostridium thermocellum.

Authors:  Hitomi Ichinose; Atsushi Kuno; Toshihisa Kotake; Makoto Yoshida; Kazuo Sakka; Jun Hirabayashi; Yoichi Tsumuraya; Satoshi Kaneko
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

6.  Directed evolution of lectins with sugar-binding specificity for 6-sulfo-galactose.

Authors:  Dan Hu; Hiroaki Tateno; Atsushi Kuno; Rikio Yabe; Jun Hirabayashi
Journal:  J Biol Chem       Date:  2012-04-05       Impact factor: 5.157

7.  Glycosaminoglycans from earthworms (Eisenia andrei).

Authors:  A-Rang Im; Youmie Park; Joon-Soo Sim; Zhenqing Zhang; Zhenling Liu; Robert J Linhardt; Yeong Shik Kim
Journal:  Glycoconj J       Date:  2009-12-16       Impact factor: 2.916

8.  An EST screen from the annelid Pomatoceros lamarckii reveals patterns of gene loss and gain in animals.

Authors:  Tokiharu Takahashi; Carmel McDougall; Jolyon Troscianko; Wei-Chung Chen; Ahamarshan Jayaraman-Nagarajan; Sebastian M Shimeld; David E K Ferrier
Journal:  BMC Evol Biol       Date:  2009-09-25       Impact factor: 3.260

9.  Identification and characterization of a chitin-binding protein purified from coelomic fluid of the lugworm Arenicola marina defining a novel protein sequence family.

Authors:  Nina Vitashenkova; Jesper Bonnet Moeller; Rikke Leth-Larsen; Anders Schlosser; Kit Peiter Lund; Ida Tornøe; Lars Vitved; Søren Hansen; Anthony Willis; Alexandra D Kharazova; Karsten Skjødt; Grith Lykke Sorensen; Uffe Holmskov
Journal:  J Biol Chem       Date:  2012-10-31       Impact factor: 5.157

10.  A novel fungal metal-dependent α-L-arabinofuranosidase of family 54 glycoside hydrolase shows expanded substrate specificity.

Authors:  Maria Lorenza Leal Motta; Jaire Alves Ferreira Filho; Ricardo Rodrigues de Melo; Leticia Maria Zanphorlin; Clelton Aparecido Dos Santos; Anete Pereira de Souza
Journal:  Sci Rep       Date:  2021-05-26       Impact factor: 4.379

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