Literature DB >> 9600842

Multiple-step method for making exceptionally well-oriented liquid-crystalline sols of macromolecular assemblies.

I Yamashita1, H Suzuki, K Namba.   

Abstract

X-ray fiber diffraction is potentially powerful in solving the atomic structure of filamentous assemblies of macromolecules, as demonstrated for tobacco mosaic virus. However, it requires extremely well-oriented sols to allow for extraction of intensities on closely located layer-lines. A high degree of orientation requires a high filament concentration to restrain the orientational freedom, but orienting concentrated sols is hampered by their high viscosity. Here, we report a systematic method that reproducibly produces extremely good orientation, which involves three steps; liquid crystallization, centrifugation and magnetic orientation. We found that a slow centrifugation can trigger a dynamic self-orientation process to form perfectly homogeneous liquid-crystalline sols, and further centrifugation to concentrate sols followed by magnetic orientation produces exceptionally well-oriented sols. The best-oriented flagellar sol showed a disorientation angle of 0.6 degrees as 1sigma of its Gaussian distribution. The new method has been successfully applied to many other systems, such as tobacco mosaic virus and F-actin. Copyright 1998 Academic Press Limited.

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Year:  1998        PMID: 9600842     DOI: 10.1006/jmbi.1998.1710

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  5 in total

1.  Molecular structure of the ParM polymer and the mechanism leading to its nucleotide-driven dynamic instability.

Authors:  David Popp; Akihiro Narita; Toshiro Oda; Tetsuro Fujisawa; Hiroshi Matsuo; Yasushi Nitanai; Mitsusada Iwasa; Kayo Maeda; Hirofumi Onishi; Yuichiro Maéda
Journal:  EMBO J       Date:  2008-01-10       Impact factor: 11.598

2.  Quick shear-flow alignment of biological filaments for X-ray fiber diffraction facilitated by methylcellulose.

Authors:  Takaaki Sugiyama; Daisuke Miyashiro; Daisuke Takao; Hiroyuki Iwamoto; Yasunobu Sugimoto; Katsuzo Wakabayashi; Shinji Kamimura
Journal:  Biophys J       Date:  2009-12-16       Impact factor: 4.033

3.  Effect of the length and effective diameter of F-actin on the filament orientation in liquid crystalline sols measured by x-ray fiber diffraction.

Authors:  T Oda; K Makino; I Yamashita; K Namba; Y Maéda
Journal:  Biophys J       Date:  1998-12       Impact factor: 4.033

4.  Structure and Intermolecular Interactions between L-Type Straight Flagellar Filaments.

Authors:  Daniel Louzon; Avi Ginsburg; Walter Schwenger; Tom Dvir; Zvonimir Dogic; Uri Raviv
Journal:  Biophys J       Date:  2017-05-23       Impact factor: 4.033

5.  Femtosecond X-ray coherent diffraction of aligned amyloid fibrils on low background graphene.

Authors:  Carolin Seuring; Kartik Ayyer; Eleftheria Filippaki; Miriam Barthelmess; Jean-Nicolas Longchamp; Philippe Ringler; Tommaso Pardini; David H Wojtas; Matthew A Coleman; Katerina Dörner; Silje Fuglerud; Greger Hammarin; Birgit Habenstein; Annette E Langkilde; Antoine Loquet; Alke Meents; Roland Riek; Henning Stahlberg; Sébastien Boutet; Mark S Hunter; Jason Koglin; Mengning Liang; Helen M Ginn; Rick P Millane; Matthias Frank; Anton Barty; Henry N Chapman
Journal:  Nat Commun       Date:  2018-05-09       Impact factor: 14.919

  5 in total

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