Literature DB >> 9593201

Thermal unfolding of small proteins with SH3 domain folding pattern.

S Knapp1, P T Mattson, P Christova, K D Berndt, A Karshikoff, M Vihinen, C I Smith, R Ladenstein.   

Abstract

The thermal unfolding of three SH3 domains of the Tec family of tyrosine kinases was studied by differential scanning calorimetry and CD spectroscopy. The unfolding transition of the three protein domains in the acidic pH region can be described as a reversible two-state process. For all three SH3 domains maximum stability was observed in the pH region 4.5 < pH < 7.0 where these domains unfold at temperatures of 353K (Btk), 342K (Itk), and 344K (Tec). At these temperatures an enthalpy change of 196 kJ/mol, 178 kJ/mol, and 169 kJ/mol was measured for Btk-, Itk-, and Tec-SH3 domains, respectively. The determined changes in heat capacity between the native and the denatured state are in an usual range expected for small proteins. Our analysis revealed that all SH3 domains studied are only weakly stabilized and have free energies of unfolding which do not exceed 12-16 kJ/mol but show quite high melting temperatures. Comparing unfolding free energies measured for eukaryotic SH3 domains with those of the topologically identical Sso7d protein from the hyperthermophile Sulfolobus solfataricus, the increased melting temperature of the thermostable protein is due to a broadening as well as a significant lifting of its stability curve. However, at their physiological temperatures, 310K for mesophilic SH3 domains and 350K for Sso7d, eukaryotic SH3 domains and Sso7d show very similar stabilities.

Mesh:

Substances:

Year:  1998        PMID: 9593201     DOI: 10.1002/(sici)1097-0134(19980515)31:3<309::aid-prot7>3.0.co;2-d

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  17 in total

1.  The design of a hyperstable mutant of the Abp1p SH3 domain by sequence alignment analysis.

Authors:  A Rath; A R Davidson
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

2.  WW: An isolated three-stranded antiparallel beta-sheet domain that unfolds and refolds reversibly; evidence for a structured hydrophobic cluster in urea and GdnHCl and a disordered thermal unfolded state.

Authors:  E K Koepf; H M Petrassi; M Sudol; J W Kelly
Journal:  Protein Sci       Date:  1999-04       Impact factor: 6.725

3.  Solution structure, dynamics and thermodynamics of the three SH3 domains of CD2AP.

Authors:  Jose L Ortega Roldan; Martin Blackledge; Nico A J van Nuland; Ana I Azuaga
Journal:  J Biomol NMR       Date:  2011-04-26       Impact factor: 2.835

4.  Toward the physical basis of thermophilic proteins: linking of enriched polar interactions and reduced heat capacity of unfolding.

Authors:  Huan-Xiang Zhou
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

5.  Multiple folding pathways of the SH3 domain.

Authors:  Jose M Borreguero; Feng Ding; Sergey V Buldyrev; H Eugene Stanley; Nikolay V Dokholyan
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

6.  Dynamics of the Tec-family tyrosine kinase SH3 domains.

Authors:  Justin M Roberts; Sreya Tarafdar; Raji E Joseph; Amy H Andreotti; Thomas E Smithgall; John R Engen; Thomas E Wales
Journal:  Protein Sci       Date:  2016-03-18       Impact factor: 6.725

7.  The Sso7d protein of Sulfolobus solfataricus: in vitro relationship among different activities.

Authors:  Annamaria Guagliardi; Laura Cerchia; Mosè Rossi
Journal:  Archaea       Date:  2002-09       Impact factor: 3.273

Review 8.  Lessons in stability from thermophilic proteins.

Authors:  Abbas Razvi; J Martin Scholtz
Journal:  Protein Sci       Date:  2006-07       Impact factor: 6.725

9.  Modulation of self-association and subsequent fibril formation in an alanine-rich helical polypeptide.

Authors:  Ayben Top; Kristi L Kiick; Christopher J Roberts
Journal:  Biomacromolecules       Date:  2008-05-02       Impact factor: 6.988

10.  Dynamics of an ultrafast folding subdomain in the context of a larger protein fold.

Authors:  Caitlin M Davis; R Brian Dyer
Journal:  J Am Chem Soc       Date:  2013-12-13       Impact factor: 15.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.