Literature DB >> 9581754

Flash decaging of tyrosine sidechains in an ion channel.

J C Miller1, S K Silverman, P M England, D A Dougherty, H A Lester.   

Abstract

A nonsense codon suppression technique was employed to incorporate ortho-nitrobenzyl tyrosine, "caged tyrosine," in place of tyrosine at any of three positions (93, 127, or 198) in the alpha subunit of the muscle nicotinic ACh receptor (nAChR) expressed in Xenopus oocytes. The ortho-nitrobenzyl group was then removed by 1 ms flashes at 300-350 nm to yield tyrosine itself while macroscopic currents were recorded during steady ACh exposure. Responses to multiple flashes showed (1) that each flash decages up to 17% of the tyrosines and (2) that two tyrosines must be decaged per receptor for a response. The conductance relaxations showed multiple kinetic components; rate constants (<0.1 s(-1) to 10(3) s(-1)) depended on pH and the site of incorporation, and relative amplitudes depended on the number of prior flashes. This method, which is potentially quite general, (1) provides a time-resolved assay for the behavior of a protein when a mutant sidechain is abruptly changed to the wild-type residue and (2) will also allow for selective decaging of sidechains that are candidates for covalent modification (such as phosphorylation) in specific proteins in intact cells.

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Year:  1998        PMID: 9581754     DOI: 10.1016/s0896-6273(00)81001-6

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   17.173


  14 in total

1.  Conformation-dependent hydrophobic photolabeling of the nicotinic receptor: electrophysiology-coordinated photochemistry and mass spectrometry.

Authors:  John F Leite; Michael P Blanton; Mona Shahgholi; Dennis A Dougherty; Henry A Lester
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-20       Impact factor: 11.205

2.  Molecular tools for cell and systems biology.

Authors:  Carsten Schultz
Journal:  HFSP J       Date:  2007-11-29

3.  Synthesis and incorporation of a caged tyrosine amino acid possessing a bioorthogonal handle.

Authors:  Marshall S Padilla; Christopher A Farley; Lindsay E Chatkewitz; Douglas D Young
Journal:  Tetrahedron Lett       Date:  2016-09-10       Impact factor: 2.415

4.  Genetically encoding a light switch in an ionotropic glutamate receptor reveals subunit-specific interfaces.

Authors:  Shujia Zhu; Morgane Riou; C Andrea Yao; Stéphanie Carvalho; Pamela C Rodriguez; Olivier Bensaude; Pierre Paoletti; Shixin Ye
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-08       Impact factor: 11.205

Review 5.  Illuminating the chemistry of life: design, synthesis, and applications of "caged" and related photoresponsive compounds.

Authors:  Hsien-Ming Lee; Daniel R Larson; David S Lawrence
Journal:  ACS Chem Biol       Date:  2009-06-19       Impact factor: 5.100

Review 6.  In vivo incorporation of non-canonical amino acids by using the chemical aminoacylation strategy: a broadly applicable mechanistic tool.

Authors:  Dennis A Dougherty; Ethan B Van Arnam
Journal:  Chembiochem       Date:  2014-07-02       Impact factor: 3.164

7.  In vivo expression of a light-activatable potassium channel using unnatural amino acids.

Authors:  Ji-Yong Kang; Daichi Kawaguchi; Irene Coin; Zheng Xiang; Dennis D M O'Leary; Paul A Slesinger; Lei Wang
Journal:  Neuron       Date:  2013-10-16       Impact factor: 17.173

8.  Light activation of Staphylococcus aureus toxin YoeBSa1 reveals guanosine-specific endoribonuclease activity.

Authors:  Amy S Larson; Paul J Hergenrother
Journal:  Biochemistry       Date:  2013-12-23       Impact factor: 3.162

Review 9.  Optical control of neuronal ion channels and receptors.

Authors:  Pierre Paoletti; Graham C R Ellis-Davies; Alexandre Mourot
Journal:  Nat Rev Neurosci       Date:  2019-09       Impact factor: 34.870

10.  Tyrosine decaging leads to substantial membrane trafficking during modulation of an inward rectifier potassium channel.

Authors:  Y Tong; G S Brandt; M Li; G Shapovalov; E Slimko; A Karschin; D A Dougherty; H A Lester
Journal:  J Gen Physiol       Date:  2001-02       Impact factor: 4.086

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