Literature DB >> 9565593

Binding of an oligopeptide to a specific plane of ice.

M E Houston1, H Chao, R S Hodges, B D Sykes, C M Kay, F D Sönnichsen, M C Loewen, P L Davies.   

Abstract

The alpha-helical antifreeze protein (AFP) from winter flounder inhibits ice growth by binding to a specific set of pyramidal surface planes that are not otherwise macroscopically expressed. The 37-residue AFP contains three 11-amino acid repeats that make a stereo-specific fit to the ice lattice along the <01-12> direction of the (20-21) and equivalent binding planes. When the AFP was shortened to delete two of the three 11-amino acid ice-binding repeats, the resulting 15-residue peptide and its variants were less helical and showed no antifreeze activity. However, when the helicity of the peptide was reinforced by an internal lactam bridge between Glu-7 and Lys-11, the minimized AFP was able to stably express the pyramidal plane (20-21) on the surface of growing ice crystals. This dynamic shaping of the ice surface by a single ice-binding repeat provides evidence that AFP adsorption to the ice lattice is not an "all-or-nothing" interaction. Instead, a partial interaction can help develop the binding site on ice to which the remainder of the AFP (or other AFP molecules) can orient and bind.

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Year:  1998        PMID: 9565593     DOI: 10.1074/jbc.273.19.11714

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  Activity of a two-domain antifreeze protein is not dependent on linker sequence.

Authors:  Nolan B Holland; Yoshiyuki Nishimiya; Sakae Tsuda; Frank D Sönnichsen
Journal:  Biophys J       Date:  2006-10-20       Impact factor: 4.033

2.  Antifreeze proteins at the ice/water interface: three calculated discriminating properties for orientation of type I proteins.

Authors:  Andrzej Wierzbicki; Pranav Dalal; Thomas E Cheatham; Jared E Knickelbein; A D J Haymet; Jeffry D Madura
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

3.  Effects of a type I antifreeze protein (AFP) on the melting of frozen AFP and AFP+solute aqueous solutions studied by NMR microimaging experiment.

Authors:  Yong Ba; Yougang Mao; Luiz Galdino; Zorigoo Günsen
Journal:  J Biol Phys       Date:  2012-11-07       Impact factor: 1.365

4.  A peek at ice binding by antifreeze proteins.

Authors:  Kim A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-25       Impact factor: 11.205

5.  Antifreeze protein from shorthorn sculpin: identification of the ice-binding surface.

Authors:  J Baardsnes; M Jelokhani-Niaraki; L H Kondejewski; M J Kuiper; C M Kay; R S Hodges; P L Davies
Journal:  Protein Sci       Date:  2001-12       Impact factor: 6.725

6.  The role of side chain conformational flexibility in surface recognition by Tenebrio molitor antifreeze protein.

Authors:  Margaret E Daley; Brian D Sykes
Journal:  Protein Sci       Date:  2003-07       Impact factor: 6.725

7.  New insights into ice growth and melting modifications by antifreeze proteins.

Authors:  Maya Bar-Dolev; Yeliz Celik; J S Wettlaufer; Peter L Davies; Ido Braslavsky
Journal:  J R Soc Interface       Date:  2012-07-11       Impact factor: 4.118

8.  Rational, yet simple, design and synthesis of an antifreeze-protein inspired polymer for cellular cryopreservation.

Authors:  Daniel E Mitchell; Neil R Cameron; Matthew I Gibson
Journal:  Chem Commun (Camb)       Date:  2015-08-21       Impact factor: 6.222

9.  Oscillations and accelerations of ice crystal growth rates in microgravity in presence of antifreeze glycoprotein impurity in supercooled water.

Authors:  Yoshinori Furukawa; Ken Nagashima; Shun-Ichi Nakatsubo; Izumi Yoshizaki; Haruka Tamaru; Taro Shimaoka; Takehiko Sone; Etsuro Yokoyama; Salvador Zepeda; Takanori Terasawa; Harutoshi Asakawa; Ken-Ichiro Murata; Gen Sazaki
Journal:  Sci Rep       Date:  2017-03-06       Impact factor: 4.379

10.  Solution structures, dynamics, and ice growth inhibitory activity of peptide fragments derived from an antarctic yeast protein.

Authors:  Syed Hussinien H Shah; Rajiv K Kar; Azren A Asmawi; Mohd Basyaruddin A Rahman; Abdul Munir A Murad; Nor M Mahadi; Mahiran Basri; Raja Noor Zaliha A Rahman; Abu B Salleh; Subhrangsu Chatterjee; Bimo A Tejo; Anirban Bhunia
Journal:  PLoS One       Date:  2012-11-28       Impact factor: 3.240

  10 in total

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