Literature DB >> 9560229

Solution structure of SpoIIAA, a phosphorylatable component of the system that regulates transcription factor sigmaF of Bacillus subtilis.

H Kovacs1, D Comfort, M Lord, I D Campbell, M D Yudkin.   

Abstract

The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components, one of which, SpoIIAA, undergoes phosphorylation and dephosphorylation. We have used NMR spectroscopy to determine the solution structure of the nonphosphorylated form of SpoIIAA. The structure shows a fold consisting of a four-stranded beta-sheet and four alpha-helices. Knowledge of the structure helps to account for the phenotype of several strains of B. subtilis that carry known spoIIAA mutations and should facilitate investigations of the conformational consequences of phosphorylation.

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Year:  1998        PMID: 9560229      PMCID: PMC20214          DOI: 10.1073/pnas.95.9.5067

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  Establishing differential gene expression in sporulating Bacillus subtilis: phosphorylation of SpoIIAA (anti-anti-sigmaF) alters its conformation and prevents formation of a SpoIIAA/SpoIIAB/ADP complex.

Authors:  T Magnin; M Lord; J Errington; M D Yudkin
Journal:  Mol Microbiol       Date:  1996-02       Impact factor: 3.501

2.  MOLMOL: a program for display and analysis of macromolecular structures.

Authors:  R Koradi; M Billeter; K Wüthrich
Journal:  J Mol Graph       Date:  1996-02

3.  The program XEASY for computer-supported NMR spectral analysis of biological macromolecules.

Authors:  C Bartels; T H Xia; M Billeter; P Güntert; K Wüthrich
Journal:  J Biomol NMR       Date:  1995-07       Impact factor: 2.835

4.  Amino acid preferences for specific locations at the ends of alpha helices.

Authors:  J S Richardson; D C Richardson
Journal:  Science       Date:  1988-06-17       Impact factor: 47.728

5.  SpoIIE governs the phosphorylation state of a protein regulating transcription factor sigma F during sporulation in Bacillus subtilis.

Authors:  F Arigoni; L Duncan; S Alper; R Losick; P Stragier
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-16       Impact factor: 11.205

6.  SpoIIAB is an anti-sigma factor that binds to and inhibits transcription by regulatory protein sigma F from Bacillus subtilis.

Authors:  L Duncan; R Losick
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-15       Impact factor: 11.205

7.  An adenosine nucleotide switch controlling the activity of a cell type-specific transcription factor in B. subtilis.

Authors:  S Alper; L Duncan; R Losick
Journal:  Cell       Date:  1994-04-22       Impact factor: 41.582

Review 8.  Crisscross regulation of cell-type-specific gene expression during development in B. subtilis.

Authors:  R Losick; P Stragier
Journal:  Nature       Date:  1992-02-13       Impact factor: 49.962

9.  The alpha-helix dipole and the properties of proteins.

Authors:  W G Hol; P T van Duijnen; H J Berendsen
Journal:  Nature       Date:  1978-06-08       Impact factor: 49.962

10.  Role of interactions between SpoIIAA and SpoIIAB in regulating cell-specific transcription factor sigma F of Bacillus subtilis.

Authors:  B Diederich; J F Wilkinson; T Magnin; M Najafi; J Errington; M D Yudkin
Journal:  Genes Dev       Date:  1994-11-01       Impact factor: 11.361

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  22 in total

1.  Crystal structure of the bacterial cell division inhibitor MinC.

Authors:  S C Cordell; R E Anderson; J Löwe
Journal:  EMBO J       Date:  2001-05-15       Impact factor: 11.598

2.  Phosphorylation induces subtle structural changes in SpoIIAA, a key regulator of sporulation.

Authors:  Joanna Clarkson; Iain D Campbell; Michael D Yudkin
Journal:  Biochem J       Date:  2003-05-15       Impact factor: 3.857

Review 3.  STAS domain structure and function.

Authors:  Alok K Sharma; Alan C Rigby; Seth L Alper
Journal:  Cell Physiol Biochem       Date:  2011-11-16

4.  Osmosensory signaling in Mycobacterium tuberculosis mediated by a eukaryotic-like Ser/Thr protein kinase.

Authors:  Stavroula K Hatzios; Christina E Baer; Tige R Rustad; M Sloan Siegrist; Jennifer M Pang; Corrie Ortega; Tom Alber; Christoph Grundner; David R Sherman; Carolyn R Bertozzi
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-05       Impact factor: 11.205

5.  Metabolon disruption: a mechanism that regulates bicarbonate transport.

Authors:  Bernardo V Alvarez; Gonzalo L Vilas; Joseph R Casey
Journal:  EMBO J       Date:  2005-06-30       Impact factor: 11.598

6.  Attenuation of late-stage disease in mice infected by the Mycobacterium tuberculosis mutant lacking the SigF alternate sigma factor and identification of SigF-dependent genes by microarray analysis.

Authors:  Deborah E Geiman; Deepak Kaushal; Chiew Ko; Sandeep Tyagi; Yukari C Manabe; Benjamin G Schroeder; Robert D Fleischmann; Norman E Morrison; Paul J Converse; Ping Chen; William R Bishai
Journal:  Infect Immun       Date:  2004-03       Impact factor: 3.441

7.  Expression of soluble, active fragments of the morphogenetic protein SpoIIE from Bacillus subtilis using a library-based construct screen.

Authors:  Andrea E Rawlings; Vladimir M Levdikov; Elena Blagova; Vicki L Colledge; Philippe J Mas; James Tunaley; Ludmila Vavrova; Keith S Wilson; Imrich Barak; Darren J Hart; Anthony J Wilkinson
Journal:  Protein Eng Des Sel       Date:  2010-09-03       Impact factor: 1.650

8.  Comparison of NMR and crystal structures highlights conformational isomerism in protein active sites.

Authors:  Pedro Serrano; Bill Pedrini; Michael Geralt; Kristaps Jaudzems; Biswaranjan Mohanty; Reto Horst; Torsten Herrmann; Marc André Elsliger; Ian A Wilson; Kurt Wüthrich
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-09-30

9.  Open and closed conformations of two SpoIIAA-like proteins (YP_749275.1 and YP_001095227.1) provide insights into membrane association and ligand binding.

Authors:  Abhinav Kumar; Andrei Lomize; Kevin K Jin; Dennis Carlton; Mitchell D Miller; Lukasz Jaroszewski; Polat Abdubek; Tamara Astakhova; Herbert L Axelrod; Hsiu Ju Chiu; Thomas Clayton; Debanu Das; Marc C Deller; Lian Duan; Julie Feuerhelm; Joanna C Grant; Anna Grzechnik; Gye Won Han; Heath E Klock; Mark W Knuth; Piotr Kozbial; S Sri Krishna; David Marciano; Daniel McMullan; Andrew T Morse; Edward Nigoghossian; Linda Okach; Ron Reyes; Christopher L Rife; Natasha Sefcovic; Henry J Tien; Christine B Trame; Henry van den Bedem; Dana Weekes; Qingping Xu; Keith O Hodgson; John Wooley; Marc André Elsliger; Ashley M Deacon; Adam Godzik; Scott A Lesley; Ian A Wilson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-12-08

Review 10.  Prestin at year 14: progress and prospect.

Authors:  David Z Z He; Sándor Lovas; Yu Ai; Yi Li; Kirk W Beisel
Journal:  Hear Res       Date:  2013-12-17       Impact factor: 3.208

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