Literature DB >> 9559056

Enzymology of bacterial lysine biosynthesis.

G Scapin1, J S Blanchard.   

Abstract

Bacteria have evolved three strategies for the synthesis of lysine from aspartate via formation of the intermediate diaminopimelate (DAP), a metabolite that is also involved in peptidoglycan formation. The objectives of this chapter are descriptions of mechanistic studies on the reactions catalyzed by dihydrodipicolinate synthase, dihydrodopicolinate reductase, tetrahydrodipicolinate N-succinyl-transferase, N-succinyl-L,L-DAP aminotransferase, N-succinyl-L,L-DAP desuccinylase, L,L-DAP epimerase, L,L-DAP decarboxylase, and DAP dehydrogenase. These enzymes are discussed in terms of kinetic, isotopic, and X-ray crystallographic data that allow one to infer the nature of interactions of each of these enzymes with its substrate(s), coenzymes, and inhibitors.

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Year:  1998        PMID: 9559056     DOI: 10.1002/9780470123188.ch8

Source DB:  PubMed          Journal:  Adv Enzymol Relat Areas Mol Biol        ISSN: 0065-258X


  32 in total

1.  Metabolomics in premature labor: a novel approach to identify patients at risk for preterm delivery.

Authors:  Roberto Romero; Shali Mazaki-Tovi; Edi Vaisbuch; Juan Pedro Kusanovic; Tinnakorn Chaiworapongsa; Ricardo Gomez; Jyh Kae Nien; Bo Hyun Yoon; Moshe Mazor; Jingqin Luo; David Banks; John Ryals; Chris Beecher
Journal:  J Matern Fetal Neonatal Med       Date:  2010-05-26

2.  Characterization of the dapA-nlpB genetic locus involved in regulation of swarming motility, cell envelope architecture, hemolysin production, and cell attachment ability in Serratia marcescens.

Authors:  Po-Chi Soo; Jun-Rong Wei; Yu-Tze Horng; Shang-Chen Hsieh; Shen-Wu Ho; Hsin-Chih Lai
Journal:  Infect Immun       Date:  2005-09       Impact factor: 3.441

3.  The Methanosarcina mazei MM2060 Gene Encodes a Bifunctional Kinase/Decarboxylase Enzyme Involved in Cobamide Biosynthesis.

Authors:  Norbert K Tavares; Carmen L Zayas; Jorge C Escalante-Semerena
Journal:  Biochemistry       Date:  2018-07-13       Impact factor: 3.162

4.  Diaminopimelic acid (DAP) analogs bearing isoxazoline moiety as selective inhibitors against meso-diaminopimelate dehydrogenase (m-Ddh) from Porphyromonas gingivalis.

Authors:  Hongguang Ma; Victoria N Stone; Huiqun Wang; Glen E Kellogg; Ping Xu; Yan Zhang
Journal:  Bioorg Med Chem Lett       Date:  2017-06-22       Impact factor: 2.823

5.  Characterization and identification of a novel candidate vaccine protein through systematic analysis of extracellular proteins of Erysipelothrix rhusiopathiae.

Authors:  Fang Shi; Yohsuke Ogawa; Akiyuki Sano; Tomoyuki Harada; Jiro Hirota; Masahiro Eguchi; Eiji Oishi; Yoshihiro Shimoji
Journal:  Infect Immun       Date:  2013-09-09       Impact factor: 3.441

6.  Inhibition of the dapE-Encoded N-Succinyl-L,L-diaminopimelic Acid Desuccinylase from Neisseria meningitidis by L-Captopril.

Authors:  Anna Starus; Boguslaw Nocek; Brian Bennett; James A Larrabee; Daniel L Shaw; Wisath Sae-Lee; Marie T Russo; Danuta M Gillner; Magdalena Makowska-Grzyska; Andrzej Joachimiak; Richard C Holz
Journal:  Biochemistry       Date:  2015-08-03       Impact factor: 3.162

7.  Kinetic and spectroscopic characterization of the E134A- and E134D-altered dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase from Haemophilus influenzae.

Authors:  Ryan Davis; David Bienvenue; Sabina I Swierczek; Danuta M Gilner; Lakshman Rajagopal; Brian Bennett; Richard C Holz
Journal:  J Biol Inorg Chem       Date:  2006-01-19       Impact factor: 3.358

Review 8.  Lysine biosynthesis in bacteria: a metallodesuccinylase as a potential antimicrobial target.

Authors:  Danuta M Gillner; Daniel P Becker; Richard C Holz
Journal:  J Biol Inorg Chem       Date:  2012-12-08       Impact factor: 3.358

9.  Substrate-mediated stabilization of a tetrameric drug target reveals Achilles heel in anthrax.

Authors:  Jarrod E Voss; Stephen W Scally; Nicole L Taylor; Sarah C Atkinson; Michael D W Griffin; Craig A Hutton; Michael W Parker; Malcolm R Alderton; Juliet A Gerrard; Renwick C J Dobson; Con Dogovski; Matthew A Perugini
Journal:  J Biol Chem       Date:  2009-11-30       Impact factor: 5.157

10.  Expansion of the tetracycline-dependent regulation toolbox for Helicobacter pylori.

Authors:  Aleksandra W Debowski; Miriam Sehnal; Tingting Liao; Keith A Stubbs; Barry J Marshall; Mohammed Benghezal
Journal:  Appl Environ Microbiol       Date:  2015-09-11       Impact factor: 4.792

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