Literature DB >> 9548953

The uvsY recombination protein of bacteriophage T4 forms hexamers in the presence and absence of single-stranded DNA.

H T Beernink1, S W Morrical.   

Abstract

A prerequisite to genetic recombination in the T4 bacteriophage is the formation of the presynaptic filament-a helical nucleoprotein filament containing stoichiometric amounts of the uvsX recombinase in complex with single-stranded DNA (ssDNA). Once formed, the filament is competent to catalyze homologous pairing and DNA strand exchange reactions. An important component in the formation of the presynaptic filament is the uvsY protein, which is required for optimal uvsX-ssDNA assembly in vitro, and essential for phage recombination in vivo. uvsY enhances uvsX activities by promoting filament formation and stabilizing filaments under conditions of low uvsX, high salt, and/or high gp32 (ssDNA-binding protein) concentrations. The molecular properties of uvsY include noncooperative binding to ssDNA and specific protein-protein interactions with both uvsX and gp32. Evidence suggests that all of these hetero-associations of the uvsY protein are important for presynaptic filament formation. However, there is currently no structural information available on the uvsY protein itself. In this study, we present the first characterization of the self-association of uvsY. Using hydrodynamic methods, we demonstrate that uvsY associates into a stable hexamer (s020,w = 6.0, M = 95 kDa) in solution and that this structure is competent to bind ssDNA. We further demonstrate that uvsY hexamers are capable of reversible association into higher aggregates in a manner dependent on both salt and protein concentration. The implications for presynaptic filament formation are discussed.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9548953     DOI: 10.1021/bi9800956

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  15 in total

Review 1.  Mediator proteins orchestrate enzyme-ssDNA assembly during T4 recombination-dependent DNA replication and repair.

Authors:  J S Bleuit; H Xu; Y Ma; T Wang; J Liu; S W Morrical
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

2.  Chemistry for the analysis of protein-protein interactions: rapid and efficient cross-linking triggered by long wavelength light.

Authors:  D A Fancy; T Kodadek
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

3.  Structural study of metastable amyloidogenic protein oligomers by photo-induced cross-linking of unmodified proteins.

Authors:  Gal Bitan
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

4.  Analytical ultracentrifugation as a contemporary biomolecular research tool.

Authors:  J L Cole; J C Hansen
Journal:  J Biomol Tech       Date:  1999-12

5.  Modulation of T4 gene 32 protein DNA binding activity by the recombination mediator protein UvsY.

Authors:  Kiran Pant; Leila Shokri; Richard L Karpel; Scott W Morrical; Mark C Williams
Journal:  J Mol Biol       Date:  2008-05-24       Impact factor: 5.469

6.  Presynaptic filament dynamics in homologous recombination and DNA repair.

Authors:  Jie Liu; Kirk T Ehmsen; Wolf-Dietrich Heyer; Scott W Morrical
Journal:  Crit Rev Biochem Mol Biol       Date:  2011-06       Impact factor: 8.250

Review 7.  DNA-pairing and annealing processes in homologous recombination and homology-directed repair.

Authors:  Scott W Morrical
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-02-02       Impact factor: 10.005

8.  Structure and mechanism of the phage T4 recombination mediator protein UvsY.

Authors:  Stefan Gajewski; Michael Brett Waddell; Sivaraja Vaithiyalingam; Amanda Nourse; Zhenmei Li; Nils Woetzel; Nathan Alexander; Jens Meiler; Stephen W White
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

9.  Insights into the mechanism of Rad51 recombinase from the structure and properties of a filament interface mutant.

Authors:  Jianhong Chen; Nicolas Villanueva; Mark A Rould; Scott W Morrical
Journal:  Nucleic Acids Res       Date:  2010-04-05       Impact factor: 16.971

10.  Functional complementation of UvsX and UvsY mutations in the mediation of T4 homologous recombination.

Authors:  Joshua N Farb; Scott W Morrical
Journal:  Nucleic Acids Res       Date:  2009-02-25       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.