Literature DB >> 9541391

Cadmium-induced crystallization of proteins: II. Crystallization of the Salmonella typhimurium histidine-binding protein in complex with L-histidine, L-arginine, or L-lysine.

S Trakhanov1, D I Kreimer, S Parkin, G F Ames, B Rupp.   

Abstract

To further investigate favorable effects of divalent cations on the formation of protein crystals, three complexes of Salmonella typhimurium histidine-binding protein were crystallized with varying concentrations of cadmium salts. For each of the three histidine-binding protein complexes, cadmium cations were found to promote or improve crystallization. The optimal cadmium concentration is ligand specific and falls within a narrow concentration range. In each case, crystals grown in the presence of cadmium diffract to better than 2.0 angstroms resolution and belong to the orthorhombic space group P2(1)2(1)2(1). From our results and from the analysis of cadmium sites in well-refined protein structures, we propose that cadmium addition provides a generally useful technique to modify crystal morphology and to improve diffraction quality.

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Year:  1998        PMID: 9541391      PMCID: PMC2143943          DOI: 10.1002/pro.5560070308

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  13 in total

1.  Purification and characterization of the periplasmic lysine-, arginine-, ornithine-binding protein (LAO) from Salmonella typhimurium.

Authors:  K Nikaido; G F Ames
Journal:  J Biol Chem       Date:  1992-10-15       Impact factor: 5.157

2.  Crystallization and preliminary X-ray crystallographic data of a histidine-binding protein from Escherichia coli.

Authors:  S D Trakhanov; E F Yusifov
Journal:  J Mol Biol       Date:  1989-06-20       Impact factor: 5.469

3.  Ligand-dependent conformational plasticity of the periplasmic histidine-binding protein HisJ. Involvement in transport specificity.

Authors:  A Wolf; K C Lee; J F Kirsch; G F Ames
Journal:  J Biol Chem       Date:  1996-08-30       Impact factor: 5.157

Review 4.  Protein crystallization.

Authors:  S D Durbin; G Feher
Journal:  Annu Rev Phys Chem       Date:  1996       Impact factor: 12.703

5.  Structure/function analysis of the periplasmic histidine-binding protein. Mutations decreasing ligand binding alter the properties of the conformational change and of the closed form.

Authors:  A Wolf; E W Shaw; B H Oh; H De Bondt; A K Joshi; G F Ames
Journal:  J Biol Chem       Date:  1995-07-07       Impact factor: 5.157

6.  2 A resolution structure of DppA, a periplasmic dipeptide transport/chemosensory receptor.

Authors:  A V Nickitenko; S Trakhanov; F A Quiocho
Journal:  Biochemistry       Date:  1995-12-26       Impact factor: 3.162

7.  Three-dimensional structures of the periplasmic lysine/arginine/ornithine-binding protein with and without a ligand.

Authors:  B H Oh; J Pandit; C H Kang; K Nikaido; S Gokcen; G F Ames; S H Kim
Journal:  J Biol Chem       Date:  1993-05-25       Impact factor: 5.157

8.  Comparison of the three-dimensional structures of recombinant human H and horse L ferritins at high resolution.

Authors:  P D Hempstead; S J Yewdall; A R Fernie; D M Lawson; P J Artymiuk; D W Rice; G C Ford; P M Harrison
Journal:  J Mol Biol       Date:  1997-05-02       Impact factor: 5.469

9.  The bacterial periplasmic histidine-binding protein. structure/function analysis of the ligand-binding site and comparison with related proteins.

Authors:  B H Oh; C H Kang; H De Bondt; S H Kim; K Nikaido; A K Joshi; G F Ames
Journal:  J Biol Chem       Date:  1994-02-11       Impact factor: 5.157

10.  Influence of divalent cations in protein crystallization.

Authors:  S Trakhanov; F A Quiocho
Journal:  Protein Sci       Date:  1995-09       Impact factor: 6.725

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  14 in total

Review 1.  Mechanism of coupling of transport to hydrolysis in bacterial ATP-binding cassette transporters.

Authors:  Amy L Davidson
Journal:  J Bacteriol       Date:  2002-03       Impact factor: 3.490

2.  Structure and assembly of an augmented Sm-like archaeal protein 14-mer.

Authors:  Cameron Mura; Martin Phillips; Anna Kozhukhovsky; David Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-31       Impact factor: 11.205

3.  Crystal structure of the C-terminal half of tropomodulin and structural basis of actin filament pointed-end capping.

Authors:  Inna Krieger; Alla Kostyukova; Atsuko Yamashita; Yasushi Nitanai; Yuichiro Maéda
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

4.  Polymorphic Protein Crystal Growth: Influence of Hydration and Ions in Glucose Isomerase.

Authors:  C M Gillespie; D Asthagiri; A M Lenhoff
Journal:  Cryst Growth Des       Date:  2014-01-02       Impact factor: 4.076

Review 5.  Can the propensity of protein crystallization be increased by using systematic screening with metals?

Authors:  Raghurama P Hegde; Gowribidanur C Pavithra; Debayan Dey; Steven C Almo; S Ramakumar; Udupi A Ramagopal
Journal:  Protein Sci       Date:  2017-06-29       Impact factor: 6.725

6.  The macromolecular complex of ICP and falcipain-2 from Plasmodium: preparation, crystallization and preliminary X-ray diffraction analysis.

Authors:  Guido Hansen; Britta Schwarzloh; Annika Rennenberg; Volker T Heussler; Rolf Hilgenfeld
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-10-27

7.  Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus.

Authors:  Tsutomu Nakamura; Mayumi Niiyama; Wakana Hashimoto; Kurumi Ida; Manabu Abe; Junji Morita; Koichi Uegaki
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-05-20       Impact factor: 1.056

8.  The N14 anti-afamin antibody Fab: a rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling.

Authors:  Andreas Naschberger; Barbara G Fürnrohr; Tihana Lenac Rovis; Suzana Malic; Klaus Scheffzek; Hans Dieplinger; Bernhard Rupp
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-11-29       Impact factor: 7.652

9.  Rapid cadmium SAD phasing at the standard wavelength (1 Å).

Authors:  Saravanan Panneerselvam; Esa Pekka Kumpula; Inari Kursula; Anja Burkhardt; Alke Meents
Journal:  Acta Crystallogr D Struct Biol       Date:  2017-06-30       Impact factor: 7.652

10.  Interaction of serum amyloid P component with hexanoyl bis(D-proline) (CPHPC).

Authors:  Simon E Kolstoe; Michelle C Jenvey; Alan Purvis; Mark E Light; Darren Thompson; Peter Hughes; Mark B Pepys; Stephen P Wood
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-07-25
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