Literature DB >> 9539445

Fixation indices in subdivided populations.

T Nagylaki1.   

Abstract

Without restricting the evolutionary forces that may be present, the theory of fixation indices, or F-statistics, in an arbitrarily subdivided population is developed systematically in terms of allelic and genotypic frequencies. The fixation indices for each homozygous genotype are expressed in terms of the fixation indices for the heterozygous genotypes. Therefore, together with the allelic frequencies, the latter suffice to describe population structure. Possible random fluctuations in the allelic frequencies (which may be caused, e.g., by finiteness of the subpopulations) are incorporated so that the fixation indices are parameters, rather than random variables, and these parameters are expressed in terms of ratios of evolutionary expectations of heterozygosities. The interpretation of some measures of population differentiation is also discussed. In particular, F(ST) is an appropriate index of gene-frequency differentiation if and only if the genetic diversity is low.

Mesh:

Year:  1998        PMID: 9539445      PMCID: PMC1460034     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  16 in total

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Authors:  M KIMURA; J F CROW
Journal:  Genetics       Date:  1964-04       Impact factor: 4.562

2.  F and g statistics in the finite island model.

Authors:  N Takahata; M Nei
Journal:  Genetics       Date:  1984-07       Impact factor: 4.562

3.  Gene identity and genetic differentiation of populations in the finite island model.

Authors:  N Takahata
Journal:  Genetics       Date:  1983-07       Impact factor: 4.562

4.  Drift variances of FST and GST statistics obtained from a finite number of isolated populations.

Authors:  M Nei; A Chakravarti
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5.  Gustave Malécot and the transition from classical to modern population genetics.

Authors:  T Nagylaki
Journal:  Genetics       Date:  1989-06       Impact factor: 4.562

6.  Estimation of inbreeding parameters in stratified populations.

Authors:  C C Cockerham; B S Weir
Journal:  Ann Hum Genet       Date:  1986-07       Impact factor: 1.670

7.  Correlations, descent measures: drift with migration and mutation.

Authors:  C C Cockerham; B S Weir
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

8.  Pattern of neutral polymorphism in a geographically structured population.

Authors:  M Kimura; T Maruyama
Journal:  Genet Res       Date:  1971-10       Impact factor: 1.588

9.  Estimation of fixation indices and gene diversities.

Authors:  M Nei; R K Chesser
Journal:  Ann Hum Genet       Date:  1983-07       Impact factor: 1.670

10.  F-statistics and analysis of gene diversity in subdivided populations.

Authors:  M Nei
Journal:  Ann Hum Genet       Date:  1977-10       Impact factor: 1.670

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  36 in total

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Journal:  Genetics       Date:  2003-01       Impact factor: 4.562

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Authors:  Matthew B Hamilton; Judith R Miller
Journal:  Genetics       Date:  2002-12       Impact factor: 4.562

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-06-29       Impact factor: 6.237

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Journal:  Genetics       Date:  2002-09       Impact factor: 4.562

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Journal:  Mol Biol Rep       Date:  2018-09-07       Impact factor: 2.316

7.  Upper bounds on FST in terms of the frequency of the most frequent allele and total homozygosity: the case of a specified number of alleles.

Authors:  Michael D Edge; Noah A Rosenberg
Journal:  Theor Popul Biol       Date:  2014-08-14       Impact factor: 1.570

Review 8.  Tsetse flies: genetics, evolution, and role as vectors.

Authors:  E S Krafsur
Journal:  Infect Genet Evol       Date:  2008-10-17       Impact factor: 3.342

9.  Population genetics as a tool to select tsetse control strategies: suppression or eradication of Glossina palpalis gambiensis in the Niayes of Senegal.

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Journal:  PLoS Negl Trop Dis       Date:  2010-05-25

10.  Additional haplogroups of Toxoplasma gondii out of Africa: population structure and mouse-virulence of strains from Gabon.

Authors:  Aurélien Mercier; Sébastien Devillard; Barthélémy Ngoubangoye; Henri Bonnabau; Anne-Laure Bañuls; Patrick Durand; Bettina Salle; Daniel Ajzenberg; Marie-Laure Dardé
Journal:  PLoS Negl Trop Dis       Date:  2010-11-02
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