Literature DB >> 9537398

The atrazine catabolism genes atzABC are widespread and highly conserved.

M L de Souza1, J Seffernick, B Martinez, M J Sadowsky, L P Wackett.   

Abstract

Pseudomonas strain ADP metabolizes the herbicide atrazine via three enzymatic steps, encoded by the genes atzABC, to yield cyanuric acid, a nitrogen source for many bacteria. Here, we show that five geographically distinct atrazine-degrading bacteria contain genes homologous to atzA, -B, and -C. The sequence identities of the atz genes from different atrazine-degrading bacteria were greater than 99% in all pairwise comparisons. This differs from bacterial genes involved in the catabolism of other chlorinated compounds, for which the average sequence identity in pairwise comparisons of the known members of a class ranged from 25 to 56%. Our results indicate that globally distributed atrazine-catabolic genes are highly conserved in diverse genera of bacteria.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9537398      PMCID: PMC107113     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  40 in total

1.  Cloning and comparison of the DNA encoding ammelide aminohydrolase and cyanuric acid amidohydrolase from three s-triazine-degrading bacterial strains.

Authors:  R W Eaton; J S Karns
Journal:  J Bacteriol       Date:  1991-02       Impact factor: 3.490

2.  The atzB gene of Pseudomonas sp. strain ADP encodes the second enzyme of a novel atrazine degradation pathway.

Authors:  K L Boundy-Mills; M L de Souza; R T Mandelbaum; L P Wackett; M J Sadowsky
Journal:  Appl Environ Microbiol       Date:  1997-03       Impact factor: 4.792

3.  Atrazine chlorohydrolase from Pseudomonas sp. strain ADP: gene sequence, enzyme purification, and protein characterization.

Authors:  M L de Souza; M J Sadowsky; L P Wackett
Journal:  J Bacteriol       Date:  1996-08       Impact factor: 3.490

4.  AtzC is a new member of the amidohydrolase protein superfamily and is homologous to other atrazine-metabolizing enzymes.

Authors:  M J Sadowsky; Z Tong; M de Souza; L P Wackett
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

5.  Parathion hydrolase specified by the Flavobacterium opd gene: relationship between the gene and protein.

Authors:  W W Mulbry; J S Karns
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

6.  Cloning of the genes for degradation of the herbicides EPTC (S-ethyl dipropylthiocarbamate) and atrazine from Rhodococcus sp. strain TE1.

Authors:  Z Q Shao; R Behki
Journal:  Appl Environ Microbiol       Date:  1995-05       Impact factor: 4.792

7.  A genetic approach to the biosynthesis of the rifamycin-chromophore in Nocardia mediterranei. IV. Identification of 3-amino-5-hydroxybenzoic acid as a direct precursor of the seven-carbon amino starter-unit.

Authors:  O Ghisalba; J Nüesch
Journal:  J Antibiot (Tokyo)       Date:  1981-01       Impact factor: 2.649

8.  Isolation and Characterization of a Pseudomonas sp. That Mineralizes the s-Triazine Herbicide Atrazine.

Authors:  R T Mandelbaum; D L Allan; L P Wackett
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

9.  Accelerated biodegradation of atrazine by a microbial consortium is possible in culture and soil.

Authors:  N A Assaf; R F Turco
Journal:  Biodegradation       Date:  1994-03       Impact factor: 3.909

10.  Cloning of 1,2-dichloroethane degradation genes of Xanthobacter autotrophicus GJ10 and expression and sequencing of the dhlA gene.

Authors:  D B Janssen; F Pries; J van der Ploeg; B Kazemier; P Terpstra; B Witholt
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

View more
  39 in total

1.  Novel psbA1 gene from a naturally occurring atrazine-resistant cyanobacterial isolate.

Authors:  Kannika Sajjaphan; Nir Shapir; Adam K Judd; Lawrence P Wackett; Michael J Sadowsky
Journal:  Appl Environ Microbiol       Date:  2002-03       Impact factor: 4.792

2.  Melamine deaminase and atrazine chlorohydrolase: 98 percent identical but functionally different.

Authors:  J L Seffernick; M L de Souza; M J Sadowsky; L P Wackett
Journal:  J Bacteriol       Date:  2001-04       Impact factor: 3.490

Review 3.  Biodegradation, biotransformation, and biocatalysis (b3).

Authors:  R E Parales; N C Bruce; A Schmid; L P Wackett
Journal:  Appl Environ Microbiol       Date:  2002-10       Impact factor: 4.792

4.  Plasmid localization and organization of melamine degradation genes in Rhodococcus sp. strain Mel.

Authors:  Anthony G Dodge; Lawrence P Wackett; Michael J Sadowsky
Journal:  Appl Environ Microbiol       Date:  2011-12-30       Impact factor: 4.792

Review 5.  Toward a systems biology perspective on enzyme evolution.

Authors:  Shelley D Copley
Journal:  J Biol Chem       Date:  2011-11-08       Impact factor: 5.157

Review 6.  Evolution of catabolic pathways: Genomic insights into microbial s-triazine metabolism.

Authors:  N Shapir; E F Mongodin; M J Sadowsky; S C Daugherty; K E Nelson; L P Wackett
Journal:  J Bacteriol       Date:  2006-11-17       Impact factor: 3.490

7.  The atzABC genes encoding atrazine catabolism are located on a self-transmissible plasmid in Pseudomonas sp. strain ADP.

Authors:  M L de Souza; L P Wackett; M J Sadowsky
Journal:  Appl Environ Microbiol       Date:  1998-06       Impact factor: 4.792

8.  Design and Optimization of a Cell-Free Atrazine Biosensor.

Authors:  Adam D Silverman; Umut Akova; Khalid K Alam; Michael C Jewett; Julius B Lucks
Journal:  ACS Synth Biol       Date:  2020-03-03       Impact factor: 5.110

9.  Prevalence of lysogeny among soil bacteria and presence of 16S rRNA and trzN genes in viral-community DNA.

Authors:  Dhritiman Ghosh; Krishnakali Roy; Kurt E Williamson; David C White; K Eric Wommack; Kerry L Sublette; Mark Radosevich
Journal:  Appl Environ Microbiol       Date:  2007-11-09       Impact factor: 4.792

10.  Nitrogen control of atrazine utilization in Pseudomonas sp. strain ADP.

Authors:  Vicente García-González; Fernando Govantes; Liz J Shaw; Richard G Burns; Eduardo Santero
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.