Literature DB >> 9526657

Small-scale isolation of genomic DNA from Streptomyces mycelia or spores.

A J Kutchma1, M A Roberts, D B Knaebel, D L Crawford.   

Abstract

We have developed a small-scale method for isolating high-quality chromosomal DNA from Streptomyces species. The entire procedure may be carried out in 2-mL microcentrifuge tubes in one day. It has been tested both quantitatively and qualitatively to ensure reliability and reproducibility. DNA yields from a variety of Streptomyces species ranged from 30 micrograms DNA/50 mg cells to over 225 micrograms DNA/50 mg cells. We used the method to isolate DNA from cells grown in liquid culture, on solid media and from spore suspensions. DNA yields and quality were assessed by spectrophotometry, restriction endonuclease digestion and random-amplified polymorphic DNA-PCR (RAPD-PCR) analysis. These confirmed that this procedure is an efficient method for isolating large amounts of high-quality DNA from a wide range of Streptomyces species.

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Year:  1998        PMID: 9526657     DOI: 10.2144/98243st05

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  8 in total

1.  Use of randomly amplified polymorphic DNA as a means of developing genus- and strain-specific Streptomyces DNA probes.

Authors:  M A Roberts; D L Crawford
Journal:  Appl Environ Microbiol       Date:  2000-06       Impact factor: 4.792

2.  Consortium of plant growth-promoting rhizobacteria enhances oilseed rape (Brassica napus L.) growth under normal and saline conditions.

Authors:  Maria Swiontek Brzezinska; Joanna Świątczak; Anna Wojciechowska; Aleksandra Burkowska-But; Agnieszka Kalwasińska
Journal:  Arch Microbiol       Date:  2022-06-15       Impact factor: 2.552

3.  Soil substrate culturing approaches recover diverse members of Actinomycetota from desert soils of Herring Island, East Antarctica.

Authors:  Nicole Benaud; Devan S Chelliah; Sin Yin Wong; Belinda C Ferrari
Journal:  Extremophiles       Date:  2022-07-13       Impact factor: 3.035

4.  A Soil-Isolated Streptomyces spororaveus Species Produces a High-Molecular-Weight Antibiotic AF1 against Fungi and Gram-Positive Bacteria.

Authors:  Pu-Chieh Chang; Shao-Chung Liu; Ming-Chun Ho; Tzu-Wen Huang; Chih-Hung Huang
Journal:  Antibiotics (Basel)       Date:  2022-05-18

5.  Family shuffling of expandase genes to enhance substrate specificity for penicillin G.

Authors:  Jyh-Shing Hsu; Yunn-Bor Yang; Chan-Hui Deng; Chia-Li Wei; Shwu-Huey Liaw; Ying-Chieh Tsai
Journal:  Appl Environ Microbiol       Date:  2004-10       Impact factor: 4.792

6.  Novel marine actinobacteria from emerald Andaman & Nicobar Islands: a prospective source for industrial and pharmaceutical byproducts.

Authors:  Balakrishnan Meena; Lawrance Anbu Rajan; Nambali Valsalan Vinithkumar; Ramalingam Kirubagaran
Journal:  BMC Microbiol       Date:  2013-06-22       Impact factor: 3.605

7.  L-Asparaginase from Streptomyces griseus NIOT-VKMA29: optimization of process variables using factorial designs and molecular characterization of L-asparaginase gene.

Authors:  Balakrishnan Meena; Lawrance Anburajan; Thadikamala Sathish; Rangamaran Vijaya Raghavan; Gopal Dharani; Nambali Valsalan Vinithkumar; Ramalingam Kirubagaran
Journal:  Sci Rep       Date:  2015-07-24       Impact factor: 4.379

8.  Molecular characterization, phylogenetic and in silico sequence analysis data of trehalose biosynthesis genes; otsA and otsB from the deep sea halophilic actinobacteria, Streptomyces qinglanensis NIOT-DSA03.

Authors:  Balakrishnan Meena; Lawrance Anburajan; Nambali Valsalan Vinithkumar; Ramalingam Kirubagaran; Gopal Dharani
Journal:  Data Brief       Date:  2021-01-21
  8 in total

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