Literature DB >> 9521748

Protonation behavior of histidine 24 and histidine 119 in forming the pH 4 folding intermediate of apomyoglobin.

B Geierstanger1, M Jamin, B F Volkman, R L Baldwin.   

Abstract

Heteronuclear NMR methods are used to study the protonation of histidine and aspartate residues in the acid-induced unfolding of recombinant sperm whale apomyoglobin. The results are combined with fluorescence and circular dichroism measurements of acid-induced unfolding of wild-type and double mutant (H24V/H119F) proteins. They are consistent with a simple model in which the failure to protonate a single buried histidine, H24, is largely responsible for the partial unfolding of native (N) wild-type apomyoglobin to the pH 4 folding intermediate (I). H24 is known to form an unusual interaction in which its side chain is buried and hydrogen-bonded to the side chain of H119. Two-dimensional 1H-15N heteronuclear NMR spectra indicate that H24 is present in the rare delta tautomeric form and remains neutral until N unfolds to I, while H119 becomes protonated before the N --> I reaction occurs. In the H24V/H119F double mutant, all histidines are protonated in N and the N --> I reaction occurs at lower pH. Therefore, the protonation of aspartate and/or glutamate residues must provide an additional driving force for the N to I reaction. Two-dimensional 1H-13C NMR experiments are used to measure the protonation of aspartates in selectively 13C-labeled apomyoglobin; the results indicate that none of the aspartate residues has a strongly depressed pKa in N, as would be expected if it forms a stabilizing salt bridge.

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Year:  1998        PMID: 9521748     DOI: 10.1021/bi972516+

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  The unfolding enthalpy of the pH 4 molten globule of apomyoglobin measured by isothermal titration calorimetry.

Authors:  M Jamin; M Antalik; S N Loh; D W Bolen; R L Baldwin
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

2.  The pKa of His-24 in the folding transition state of apomyoglobin.

Authors:  M Jamin; B Geierstanger; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-15       Impact factor: 11.205

3.  A new alkaline lipase obtained from the metagenome of marine sponge Ircinia sp.

Authors:  Jing Su; Fengli Zhang; Wei Sun; Valliappan Karuppiah; Guangya Zhang; Zhiyong Li; Qun Jiang
Journal:  World J Microbiol Biotechnol       Date:  2015-04-29       Impact factor: 3.312

4.  Enhanced picture of protein-folding intermediates using organic solvents in H/D exchange and quench-flow experiments.

Authors:  Chiaki Nishimura; H Jane Dyson; Peter E Wright
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-15       Impact factor: 11.205

5.  Elucidation of a pH-folding switch in the Pseudomonas syringae effector protein AvrPto.

Authors:  Jennifer E Dawson; Jolita Seckute; Soumya De; Samuel A Schueler; Aaron B Oswald; Linda K Nicholson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-07       Impact factor: 11.205

6.  Structural characterization of partially folded intermediates of apomyoglobin H64F.

Authors:  Stephan Schwarzinger; Ronaldo Mohana-Borges; Gerard J A Kroon; H Jane Dyson; Peter E Wright
Journal:  Protein Sci       Date:  2008-02       Impact factor: 6.725

7.  Energetic frustration of apomyoglobin folding: role of the B helix.

Authors:  Chiaki Nishimura; H Jane Dyson; Peter E Wright
Journal:  J Mol Biol       Date:  2010-01-04       Impact factor: 5.469

Review 8.  Folding of apomyoglobin: Analysis of transient intermediate structure during refolding using quick hydrogen deuterium exchange and NMR.

Authors:  Chiaki Nishimura
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2017       Impact factor: 3.493

9.  PsaF Is a Membrane-Localized pH Sensor That Regulates psaA Expression in Yersinia pestis.

Authors:  Joshua D Quinn; Eric H Weening; Virginia L Miller
Journal:  J Bacteriol       Date:  2021-07-22       Impact factor: 3.490

10.  Switching Protein Conformational Substates by Protonation and Mutation.

Authors:  Abhishek Narayan; Athi N Naganathan
Journal:  J Phys Chem B       Date:  2018-08-10       Impact factor: 2.991

  10 in total

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